RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 ICOSLGO75144 302 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 TRIM3O75382 744 aaPredicted RBP11.51□□□□□ -0.57
SNAI1-201ENST00000244050 SLC43A1O75387 559 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 GP1BAP07359 652 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 EPXP11678 715 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 CD59P13987 128 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 ACP1P24666 158 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 EDNRAP25101 427 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 TACR3P29371 465 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 CTXN1P60606 82 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 TRA2AQ13595 282 aaKnown RBP eCLIP11.51□□□□□ -0.57
SNAI1-201ENST00000244050 BCL2A1Q16548 175 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 TBRG1Q3YBR2 411 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 SLC6A19Q695T7 634 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 SLC16A9Q7RTY1 509 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 C9orf40Q8IXQ3 194 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 UBE2J2Q8N2K1 259 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 C10orf53Q8N6V4 93 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 AGBL5Q8NDL9 886 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 OR6K6Q8NGW6 343 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 ZNF563Q8TA94 476 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 HAVCR2Q8TDQ0 301 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 RFT1Q96AA3 541 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 CMTM3Q96MX0 182 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 LPAR4Q99677 370 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 THAP7Q9BT49 309 aaPredicted RBP11.51□□□□□ -0.57
SNAI1-201ENST00000244050 WACQ9BTA9 647 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 TGIF2Q9GZN2 237 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 FKRPQ9H9S5 495 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 ACOXLQ9NUZ1 547 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 COPS7AQ9UBW8 275 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 MSRB2Q9Y3D2 182 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 NBEAQ8NFP9 2946 aa11.51□□□□□ -0.57
SNAI1-201ENST00000244050 OR6C76A6NM76 312 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 ALG1L2C9J202 215 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 FZD7O75084 574 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 TMEM127O75204 238 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 PSKH1P11801 424 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 ZNF117Q03924 483 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 IL11RAQ14626 422 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 HLA-DQA1Q5Y7H0 255 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 GPR139Q6DWJ6 353 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 IL20RBQ6UXL0 311 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 DBX2Q6ZNG2 339 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 LANCL3Q6ZV70 420 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 BPHLQ86WA6 291 aaPredicted RBP11.5□□□□□ -0.57
SNAI1-201ENST00000244050 LSM14AQ8ND56 463 aaKnown RBP11.5□□□□□ -0.57
SNAI1-201ENST00000244050 PLPP5Q8NEB5 264 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 TRIM63Q969Q1 353 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 KTI12Q96EK9 354 aaPredicted RBP11.5□□□□□ -0.57
SNAI1-201ENST00000244050 GAL3ST4Q96RP7 486 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 TTTY10Q9BZA0 68 aa11.5□□□□□ -0.57
SNAI1-201ENST00000244050 RPRD1BQ9NQG5 326 aaKnown RBP11.5□□□□□ -0.57
SNAI1-201ENST00000244050 IGLV3-12A0A075B6K2 115 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 CENPXA8MT69 81 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 ZNF879B4DU55 563 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 RGS13O14921 159 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 CDC40O60508 579 aaKnown RBP eCLIP11.49□□□□□ -0.57
SNAI1-201ENST00000244050 CPNE3O75131 537 aaKnown RBP11.49□□□□□ -0.57
SNAI1-201ENST00000244050 PAHP00439 452 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 HIST1H2ABP04908 130 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 HEXBP07686 556 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 TACSTD2P09758 323 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 FGF5P12034 268 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 ATF1P18846 271 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 AHCYP23526 432 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 IL12BP29460 328 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 PNLIPRP2P54317 469 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 FOXL2P58012 376 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 IFITM2Q01629 132 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 RPL18Q07020 188 aaKnown RBP11.49□□□□□ -0.57
SNAI1-201ENST00000244050 ZFP36L1Q07352 338 aaKnown RBP11.49□□□□□ -0.57
SNAI1-201ENST00000244050 MRPL28Q13084 256 aaKnown RBP11.49□□□□□ -0.57
SNAI1-201ENST00000244050 TATDN3Q17R31 274 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 ZFP69Q49AA0 526 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 YIF1BQ5BJH7 314 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 ZNF57Q68EA5 555 aaPredicted RBP11.49□□□□□ -0.57
SNAI1-201ENST00000244050 HIST3H2AQ7L7L0 130 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 GHDCQ8N2G8 530 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 ZNF441Q8N8Z8 693 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 OR1N1Q8NGS0 311 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 ZCCHC14Q8WYQ9 949 aaKnown RBP11.49□□□□□ -0.57
SNAI1-201ENST00000244050 HIST1H2ACQ93077 130 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 TAAR8Q969N4 342 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 RNF166Q96A37 237 aaPredicted RBP11.49□□□□□ -0.57
SNAI1-201ENST00000244050 MNTQ99583 582 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 RTN4RQ9BZR6 473 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 WWTR1Q9GZV5 400 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 HDHD2Q9H0R4 259 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 CCDC86Q9H6F5 360 aaKnown RBP11.49□□□□□ -0.57
SNAI1-201ENST00000244050 NLKQ9UBE8 527 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 RABL2AQ9UBK7 228 aaPredicted RBP11.49□□□□□ -0.57
SNAI1-201ENST00000244050 GRHPRQ9UBQ7 328 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 NUFIP1Q9UHK0 495 aaKnown RBP11.49□□□□□ -0.57
SNAI1-201ENST00000244050 SPATA2Q9UM82 520 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 RABL2BQ9UNT1 228 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 ZNF281Q9Y2X9 895 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 ITPR1Q14643 2758 aa11.49□□□□□ -0.57
SNAI1-201ENST00000244050 IDSB3KWA1 339 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms