RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 ECSITQ9BQ95 431 aa11.1□□□□□ -0.63
PDZD11-201ENST00000239666 CPPED1Q9BRF8 314 aaPredicted RBP11.1□□□□□ -0.63
PDZD11-201ENST00000239666 ZNF442Q9H7R0 627 aa11.1□□□□□ -0.63
PDZD11-201ENST00000239666 KAT8Q9H7Z6 458 aaKnown RBP11.1□□□□□ -0.63
PDZD11-201ENST00000239666 CRLF2Q9HC73 371 aa11.1□□□□□ -0.63
PDZD11-201ENST00000239666 GPR35Q9HC97 309 aa11.1□□□□□ -0.63
PDZD11-201ENST00000239666 CA10Q9NS85 328 aa11.1□□□□□ -0.63
PDZD11-201ENST00000239666 GID8Q9NWU2 228 aa11.1□□□□□ -0.63
PDZD11-201ENST00000239666 KLHL14Q9P2G3 628 aa11.1□□□□□ -0.63
PDZD11-201ENST00000239666 MOKQ9UQ07 419 aa11.1□□□□□ -0.63
PDZD11-201ENST00000239666 POFUT2Q9Y2G5 429 aa11.1□□□□□ -0.63
PDZD11-201ENST00000239666 IGHV1-18A0A0C4DH31 117 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 LOC390937A0A1W2PQ73 354 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 TRAPPC13A5PLN9 417 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 EIF4EBP3O60516 100 aaPredicted RBP11.09□□□□□ -0.63
PDZD11-201ENST00000239666 UPK3AO75631 287 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 FARS2O95363 451 aaKnown RBP11.09□□□□□ -0.63
PDZD11-201ENST00000239666 PTHP01270 115 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 IGF2P01344 180 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 IGLV1-44P01699 117 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 AHCYP23526 432 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 PCGF2P35227 344 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 PDLIM4P50479 330 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 FOXG1P55316 489 aaPredicted RBP11.09□□□□□ -0.63
PDZD11-201ENST00000239666 RPS23P62266 143 aaKnown RBP11.09□□□□□ -0.63
PDZD11-201ENST00000239666 HOXC5Q00444 222 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 NAAAQ02083 359 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 TRMT5Q32P41 509 aaKnown RBP11.09□□□□□ -0.63
PDZD11-201ENST00000239666 HSP90B2PQ58FF3 399 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 REP15Q6BDI9 236 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 ZNF627Q7L945 461 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 PIWIL3Q7Z3Z3 882 aaKnown RBP11.09□□□□□ -0.63
PDZD11-201ENST00000239666 OR8J3Q8NGG0 315 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 OR6N1Q8NGY5 312 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 NEU4Q8WWR8 484 aaPredicted RBP11.09□□□□□ -0.63
PDZD11-201ENST00000239666 OR2M2Q96R28 347 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 NANSQ9NR45 359 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 TMEM160Q9NX00 188 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 LPAR3Q9UBY5 353 aa11.09□□□□□ -0.63
PDZD11-201ENST00000239666 CSPG4Q6UVK1 2322 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 SLC22A23A1A5C7 686 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 A8MV72 311 aaPredicted RBP11.08□□□□□ -0.64
PDZD11-201ENST00000239666 CENPBD1B2RD01 187 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 INAFM1C9JVW0 142 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 ATP6V1G2-DDX39BF2Z307 99 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 MS4A18H0YCH9 400 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 NDUFAB1O14561 156 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 SLC22A2O15244 555 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 TPST1O60507 370 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 UBL3O95164 117 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 ADORA3P0DMS8 318 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 THRBP10828 461 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 H2AFXP16104 143 aaPredicted RBP11.08□□□□□ -0.64
PDZD11-201ENST00000239666 HTR2AP28223 471 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 AQP1P29972 269 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 CAPZA2P47755 286 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 EVX1P49640 407 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 PPOXP50336 477 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 CDH12P55289 794 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 ARF1P84077 181 aaKnown RBP11.08□□□□□ -0.64
PDZD11-201ENST00000239666 POU3F1Q03052 451 aaPredicted RBP11.08□□□□□ -0.64
PDZD11-201ENST00000239666 ZP4Q12836 540 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 VMACQ2NL98 169 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 CEACAM16Q2WEN9 425 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 MS4A18Q3C1V0 323 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 ENTPD8Q5MY95 495 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 CCDC80Q76M96 950 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 SLC46A3Q7Z3Q1 461 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 C20orf196Q8IYI0 205 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 KDM8Q8N371 416 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 FBXO17Q96EF6 278 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 ARHGDIGQ99819 225 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 PIMREGQ9BSJ6 248 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 PCDHAC1Q9H158 963 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 MS4A5Q9H3V2 200 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 C1orf198Q9H425 327 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 B3GAT1Q9P2W7 334 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 GPR160Q9UJ42 338 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 ZNF229Q9UJW7 825 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 CDC42EP3Q9UKI2 254 aa11.08□□□□□ -0.64
PDZD11-201ENST00000239666 TLN2Q9Y4G6 2542 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 IGKV1D-42A0A075B6H8 117 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 GMNCA6NCL1 334 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 PLPP3O14495 311 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 TRAF3IP2O43734 574 aaPredicted RBP11.07□□□□□ -0.64
PDZD11-201ENST00000239666 RAB36O95755 333 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 BGLAPP02818 100 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 OR4A8P0C604 315 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 NPR2P20594 1047 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 USF1P22415 310 aaPredicted RBP11.07□□□□□ -0.64
PDZD11-201ENST00000239666 RBM34P42696 430 aaKnown RBP11.07□□□□□ -0.64
PDZD11-201ENST00000239666 GZMKP49863 264 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 ARFIP2P53365 341 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 SELENOVP59797 346 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 VLDLRP98155 873 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 GALK2Q01415 458 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 SPOCK1Q08629 439 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 DUSP7Q16829 419 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 GSG1Q2KHT4 349 aa11.07□□□□□ -0.64
PDZD11-201ENST00000239666 CHRFAM7AQ494W8 412 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms