RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 GRK1Q15835 563 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 CBLN3Q6UW01 205 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 COMMD7Q86VX2 200 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 ZNF676Q8N7Q3 588 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 OR6N2Q8NGY6 317 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 CCDC74AQ96AQ1 378 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 LPAR4Q99677 370 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 CDCP1Q9H5V8 836 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 TAS2R5Q9NYW4 299 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 FBXL3Q9UKT7 428 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 HEATR5AQ86XA9 2040 aa17.02■□□□□ 0.32
CPSF3-201ENST00000238112 I3L521 148 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 DCTN6O00399 190 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 ZNF432O94892 652 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 ABHD16AO95870 558 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 IGHV4-34P06331 123 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 THEGLP0DJG4 465 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 CPN1P15169 458 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 IFNGR1P15260 489 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 ADH7P40394 386 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 RPL18Q07020 188 aaKnown RBP17.02■□□□□ 0.31
CPSF3-201ENST00000238112 EMC4Q5J8M3 183 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 FNDC7Q5VTL7 733 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 LRRTM1Q86UE6 522 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 ZNF227Q86WZ6 799 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 RBP7Q96R05 134 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 WBP1LQ9NX94 342 aa17.02■□□□□ 0.31
CPSF3-201ENST00000238112 PPIEQ9UNP9 301 aaKnown RBP17.02■□□□□ 0.31
CPSF3-201ENST00000238112 RPS10-NUDT3A0A1W2PQS6 291 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 ZNF264O43296 627 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 TXNDC12O95881 172 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 RENP00797 406 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 HIST1H2ABP04908 130 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 ANXA7P20073 488 aaKnown RBP17.01■□□□□ 0.31
CPSF3-201ENST00000238112 LTBQ06643 244 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 CBFBQ13951 182 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 FZD2Q14332 565 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 HIST3H2AQ7L7L0 130 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 SDR16C5Q8N3Y7 309 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 SPICQ8N5J4 248 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 ZNF563Q8TA94 476 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 PCNPQ8WW12 178 aaKnown RBP17.01■□□□□ 0.31
CPSF3-201ENST00000238112 HIST1H2ACQ93077 130 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 CLIP3Q96DZ5 547 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 TCTN2Q96GX1 697 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 KLHL15Q96M94 604 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 MAP3K3Q99759 626 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 DHRS9Q9BPW9 319 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 WDR76Q9H967 626 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 C17orf105B2RV13 164 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 NDUFB6O95139 128 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 ITPKBP27987 946 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 RIPPLY1Q0D2K3 151 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 SERTAD2Q14140 314 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 MESTQ5EB52 335 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 OR2G2Q8NGZ5 317 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 ZNF417Q8TAU3 575 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 LRRC20Q8TCA0 184 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 THEM6Q8WUY1 208 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 TMEM106AQ96A25 262 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 TSPAN32Q96QS1 320 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 PELOQ9BRX2 385 aaKnown RBP17.01■□□□□ 0.31
CPSF3-201ENST00000238112 FKRPQ9H9S5 495 aa17.01■□□□□ 0.31
CPSF3-201ENST00000238112 EXOSC3Q9NQT5 275 aaKnown RBP17.01■□□□□ 0.31
CPSF3-201ENST00000238112 A0A1B0GTH9 108 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 TMEM212A6NML5 194 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 ZNF254O75437 659 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 CLPSP04118 112 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 ALDOBP05062 364 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 GIPP09681 153 aaPredicted RBP17■□□□□ 0.31
CPSF3-201ENST00000238112 TMIGD3P0DMS9 266 aaPredicted RBP17■□□□□ 0.31
CPSF3-201ENST00000238112 FAUP35544 74 aaKnown RBP17■□□□□ 0.31
CPSF3-201ENST00000238112 PPM1FP49593 454 aaPredicted RBP17■□□□□ 0.31
CPSF3-201ENST00000238112 PSMA6P60900 246 aaKnown RBP17■□□□□ 0.31
CPSF3-201ENST00000238112 EGR4Q05215 589 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 HTR4Q13639 388 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 DPY19L4Q7Z388 723 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 GPR148Q8TDV2 347 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 KTI12Q96EK9 354 aaPredicted RBP17■□□□□ 0.31
CPSF3-201ENST00000238112 MNTQ99583 582 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 NKX2-4Q9H2Z4 354 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 PCDHGA5Q9Y5G8 931 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 TMEM14AQ9Y6G1 99 aa17■□□□□ 0.31
CPSF3-201ENST00000238112 TRAV8-7A0A075B6U6 113 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 TEX51A0A1B0GUA7 166 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 OR4C45A6NMZ5 311 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 GLSO94925 669 aaPredicted RBP16.99■□□□□ 0.31
CPSF3-201ENST00000238112 UTS2O95399 124 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 CFDP00746 253 aaPredicted RBP16.99■□□□□ 0.31
CPSF3-201ENST00000238112 M6PRP20645 277 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 ENPP1P22413 925 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 MAZP56270 477 aaKnown RBP16.99■□□□□ 0.31
CPSF3-201ENST00000238112 EGR3Q06889 387 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 ODF4Q2M2E3 257 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 ZNF626Q68DY1 528 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 GLB1L2Q8IW92 636 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 UXS1Q8NBZ7 420 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 MRPL38Q96DV4 380 aaKnown RBP16.99■□□□□ 0.31
CPSF3-201ENST00000238112 NARFLQ9H6Q4 476 aa16.99■□□□□ 0.31
CPSF3-201ENST00000238112 CA10Q9NS85 328 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms