RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ARHGAP1Q07960 439 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 PDE7AQ13946 482 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 MEPCEQ7L2J0 689 aaKnown RBP11.92□□□□□ -0.5
MSH2-201ENST00000233146 SCN4BQ8IWT1 228 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 OR4K17Q8NGC6 315 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 M1APQ8TC57 530 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 OR5V1Q9UGF6 321 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 SHPKQ9UHJ6 478 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 BRWD3Q6RI45 1802 aa11.92□□□□□ -0.5
MSH2-201ENST00000233146 C9J4A7 227 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 PRAMEF26H0Y7S4 382 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 CCSO14618 274 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 ADAP1O75689 374 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 IL18BPO95998 194 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 FURINP09958 794 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 RGRP47804 291 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 GPR15P49685 360 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 RPS11P62280 158 aaKnown RBP eCLIP11.91□□□□□ -0.5
MSH2-201ENST00000233146 MC1RQ01726 317 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 JOSD1Q15040 202 aaPredicted RBP11.91□□□□□ -0.5
MSH2-201ENST00000233146 NIPAL3Q6P499 406 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 FJX1Q86VR8 437 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 WDR92Q96MX6 357 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 BRF2Q9HAW0 419 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 KLK14Q9P0G3 267 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 IGLV3-10A0A075B6K4 115 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 TMEM210A6NLX4 147 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 M0R143 59 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 AKAIN1P0CW23 69 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 CKBP12277 381 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 HTR2CP28335 458 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 CD34P28906 385 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 GPR3P46089 330 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 SLC6A9P48067 706 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 PNLIPRP1P54315 467 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 RPS26P62854 115 aaKnown RBP11.91□□□□□ -0.5
MSH2-201ENST00000233146 PRSS53Q2L4Q9 553 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 C9orf64Q5T6V5 341 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 ZNF772Q68DY9 489 aaPredicted RBP11.91□□□□□ -0.5
MSH2-201ENST00000233146 GALNT16Q8N428 558 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 HSD17B11Q8NBQ5 300 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 SCAMP5Q8TAC9 235 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 AUTS2Q8WXX7 1259 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 MIB2Q96AX9 1013 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 PRRC1Q96M27 445 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 KIF26AQ9ULI4 1882 aaPredicted RBP11.91□□□□□ -0.5
MSH2-201ENST00000233146 PTPRDP23468 1912 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 H7BY64 318 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 OR1F1O43749 312 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 SPARCP09486 303 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 EDNRBP24530 442 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 IFNGR2P38484 337 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 CLDN12P56749 244 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 RPS23P62266 143 aaKnown RBP11.91□□□□□ -0.5
MSH2-201ENST00000233146 RBX1P62877 108 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 PRKCZQ05513 592 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 MAJINQ3KP22 176 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 DMRTA1Q5VZB9 504 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 OR2A12Q8NGT7 310 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 HPSE2Q8WWQ2 592 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 ASB17Q8WXJ9 295 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 IGSF8Q969P0 613 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 FAM46AQ96IP4 442 aaKnown RBP11.91□□□□□ -0.5
MSH2-201ENST00000233146 PACRGQ96M98 296 aaPredicted RBP11.91□□□□□ -0.5
MSH2-201ENST00000233146 PLXNB2O15031 1838 aa11.91□□□□□ -0.5
MSH2-201ENST00000233146 PATJQ8NI35 1801 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 CDHR4A6H8M9 788 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 ANKRD66B4E2M5 251 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 TMEM127O75204 238 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 OR2C1O95371 312 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 SERPINA5P05154 406 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 MMP10P09238 476 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 PYCR1P32322 319 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 DHPSP49366 369 aaPredicted RBP11.9□□□□□ -0.5
MSH2-201ENST00000233146 DHRS2Q13268 280 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 FRMD1Q8N878 549 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 ZNF248Q8NDW4 579 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 CPEB3Q8NE35 698 aaKnown RBP11.9□□□□□ -0.5
MSH2-201ENST00000233146 KISS1RQ969F8 398 aaPredicted RBP11.9□□□□□ -0.5
MSH2-201ENST00000233146 PTCHD1Q96NR3 888 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 OR14A2Q96R54 314 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 ZNF607Q96SK3 696 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 IL17CQ9P0M4 197 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 NCDNQ9UBB6 729 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 UPB1Q9UBR1 384 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 SLC23A2Q9UGH3 650 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 OGG1O15527 345 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 PRICKLE3O43900 615 aaPredicted RBP11.9□□□□□ -0.5
MSH2-201ENST00000233146 PLGP00747 810 aaPredicted RBP11.9□□□□□ -0.5
MSH2-201ENST00000233146 SRMP19623 302 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 MAOAP21397 527 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 AQP2P41181 271 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 ZNF85Q03923 595 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 CD163Q86VB7 1156 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 OR1J2Q8NGS2 313 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 FOXRED1Q96CU9 486 aaPredicted RBP11.9□□□□□ -0.5
MSH2-201ENST00000233146 ZNF350Q9GZX5 532 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 RAB33BQ9H082 229 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 TRPV4Q9HBA0 871 aa11.9□□□□□ -0.5
MSH2-201ENST00000233146 FBXO4Q9UKT5 387 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms