RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 S100A11P31949 105 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 DDOSTP39656 456 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 VEGFBP49765 207 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 TANGO2Q6ICL3 276 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 KDM8Q8N371 416 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 FRMD1Q8N878 549 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 DMBX1Q8NFW5 382 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 TNFRSF12AQ9NP84 129 aa12.35□□□□□ -0.43
NEK4-201ENST00000233027 F11P03951 625 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 TEAD1P28347 426 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 NPY4RP50391 375 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 DCAF7P61962 342 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 SNRPGP62308 76 aaKnown RBP12.34□□□□□ -0.43
NEK4-201ENST00000233027 YOD1Q5VVQ6 348 aaPredicted RBP12.34□□□□□ -0.43
NEK4-201ENST00000233027 KANSL1Q7Z3B3 1105 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 OCSTAMPQ9BR26 566 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 UBQLN3Q9H347 655 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 KIF25Q9UIL4 384 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 CHST2Q9Y4C5 530 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 HSD17B6O14756 317 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 MRPL33O75394 65 aaKnown RBP12.34□□□□□ -0.43
NEK4-201ENST00000233027 MTHFD2P13995 350 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 KCNIP4Q6PIL6 250 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 OGFOD3Q6PK18 319 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 OR5L1Q8NGL2 311 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 PPP1R35Q8TAP8 253 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 PIGTQ969N2 578 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 ARSGQ96EG1 525 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 FAM212BQ9NTI7 297 aaPredicted RBP12.34□□□□□ -0.43
NEK4-201ENST00000233027 FBXO7Q9Y3I1 522 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 LOC100289279A0A1B0GTE1 492 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 GALR3O60755 368 aaPredicted RBP12.34□□□□□ -0.43
NEK4-201ENST00000233027 KCNK2O95069 426 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 PCBD1P61457 104 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 ACSM1Q08AH1 577 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 PMPCAQ10713 525 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 RNLSQ5VYX0 342 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 LYSMD4Q5XG99 296 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 SLC22A25Q6T423 547 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 ACOXLQ9NUZ1 547 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 PTTG3PQ9NZH4 202 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 KRBOX1C9JBD0 128 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 HCRTR1O43613 425 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 SCRG1O75711 98 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 IGFBP6P24592 240 aaPredicted RBP12.34□□□□□ -0.43
NEK4-201ENST00000233027 BAXQ07812 192 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 SCGB2A2Q13296 93 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 ESCO2Q56NI9 601 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 PAN3Q58A45 887 aaKnown RBP12.34□□□□□ -0.43
NEK4-201ENST00000233027 SYT14P1Q58G82 188 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 FAM219BQ5XKK7 198 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 PPP1R3BQ86XI6 285 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 SUMF1Q8NBK3 374 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 CLEC1AQ8NC01 280 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 TERB2Q8NHR7 220 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 TCEAL7Q9BRU2 100 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 PARP12Q9H0J9 701 aaKnown RBP12.34□□□□□ -0.43
NEK4-201ENST00000233027 GNG13Q9P2W3 67 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 TEX51A0A1B0GUA7 166 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 PHF1O43189 567 aaPredicted RBP12.34□□□□□ -0.43
NEK4-201ENST00000233027 ATP1B1P05026 303 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 SERPINF1P36955 418 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 MFSD12Q6NUT3 480 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 VHLLQ6RSH7 139 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 CPEB2Q7Z5Q1 589 aaKnown RBP12.34□□□□□ -0.43
NEK4-201ENST00000233027 ADGRF3Q8IZF5 1079 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 TMEM99Q8N816 258 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 OR51S1Q8NGJ8 323 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 OR5M1Q8NGP8 315 aa12.34□□□□□ -0.43
NEK4-201ENST00000233027 IGLV3-10A0A075B6K4 115 aa12.33□□□□□ -0.43
NEK4-201ENST00000233027 SLC5A10A0PJK1 596 aa12.33□□□□□ -0.43
NEK4-201ENST00000233027 PDGFAP04085 211 aa12.33□□□□□ -0.43
NEK4-201ENST00000233027 ZNF74Q16587 644 aa12.33□□□□□ -0.43
NEK4-201ENST00000233027 GLCCI1Q86VQ1 547 aa12.33□□□□□ -0.43
NEK4-201ENST00000233027 OR52N1Q8NH53 320 aa12.33□□□□□ -0.43
NEK4-201ENST00000233027 MSI2Q96DH6 328 aaKnown RBP12.33□□□□□ -0.43
NEK4-201ENST00000233027 C20orf24Q9BUV8 137 aa12.33□□□□□ -0.43
NEK4-201ENST00000233027 ACER3Q9NUN7 267 aa12.33□□□□□ -0.43
NEK4-201ENST00000233027 ADAMTSL4Q6UY14 1074 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 DCXRQ7Z4W1 244 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 OR6C1Q96RD1 312 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 ETV7Q9Y603 341 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 A0A1B0GUL6 1792 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 ZNF728P0DKX0 622 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 NAGAP17050 411 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 LIM2P55344 173 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 PHLDA2Q53GA4 152 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 EID2Q8N6I1 236 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 CDCA3Q99618 268 aaPredicted RBP12.33□□□□□ -0.44
NEK4-201ENST00000233027 SLC25A37Q9NYZ2 338 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 TTLL8A6PVC2 850 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 FOLR1P15328 257 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 ZNF93P35789 620 aaPredicted RBP12.33□□□□□ -0.44
NEK4-201ENST00000233027 HOXA1P49639 335 aaPredicted RBP12.33□□□□□ -0.44
NEK4-201ENST00000233027 PGFP49763 221 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 ABHD17CQ6PCB6 329 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 CREB3L2Q70SY1 520 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 FJX1Q86VR8 437 aa12.33□□□□□ -0.44
NEK4-201ENST00000233027 SLC22A24Q8N4F4 322 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms