RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 A0A1B0GX12 115 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 A0A1W2PRG6 482 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 SMIM10L1P0DMW3 83 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 SRMP19623 302 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 CMPK1P30085 196 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 OR1D5P58170 312 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 AVL9Q8NBF6 648 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 OR13C5Q8NGS8 318 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 OR52I2Q8NH67 350 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 PNPLA2Q96AD5 504 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 HAVCR1Q96D42 359 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 ELMOD3Q96FG2 381 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 SMIM10Q96HG1 83 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 GFI1Q99684 422 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 CCDC3Q9BQI4 270 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 NOX3Q9HBY0 568 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 C12orf4Q9NQ89 552 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 DCDC2BA2VCK2 349 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 SNRNP200O75643 2136 aaKnown RBP18.73■□□□□ 0.59
SNX3-201ENST00000230085 TSPAN9O75954 239 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 HIST1H2ABP04908 130 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 CEACAM1P13688 526 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 PNLIPP16233 465 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 S100A11P31949 105 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 NOVA1P51513 510 aaKnown RBP18.73■□□□□ 0.59
SNX3-201ENST00000230085 DLX5P56178 289 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 LGALS3BPQ08380 585 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 ZNF273Q14593 569 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 ZSWIM7Q19AV6 140 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 TMEM255AQ5JRV8 349 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 HIST3H2AQ7L7L0 130 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 PRSS45Q7RTY3 260 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 OR4K14Q8NGD5 310 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 MOSPD2Q8NHP6 518 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 HIST1H2ACQ93077 130 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 B3GNT4Q9C0J1 378 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 PPIEQ9UNP9 301 aaKnown RBP18.73■□□□□ 0.59
SNX3-201ENST00000230085 FOXJ3Q9UPW0 622 aa18.73■□□□□ 0.59
SNX3-201ENST00000230085 TOR1AO14656 332 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 ALDOBP05062 364 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 MRPL3P09001 348 aaKnown RBP18.72■□□□□ 0.59
SNX3-201ENST00000230085 PPP3CBP16298 524 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 DIO1P49895 249 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 SEC61A1P61619 476 aaKnown RBP18.72■□□□□ 0.59
SNX3-201ENST00000230085 RPS15AP62244 130 aaKnown RBP18.72■□□□□ 0.59
SNX3-201ENST00000230085 HLXQ14774 488 aaPredicted RBP18.72■□□□□ 0.59
SNX3-201ENST00000230085 DCST2Q5T1A1 773 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 PWWP2BQ6NUJ5 590 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 LINC00114Q6XXX2 140 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 LINGO2Q7L985 606 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 PAQR7Q86WK9 346 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 CDRT4Q8N9R6 151 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 OR52E1Q8NGJ3 308 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 MIB2Q96AX9 1013 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 DACT3Q96B18 629 aaPredicted RBP18.72■□□□□ 0.59
SNX3-201ENST00000230085 S100A16Q96FQ6 103 aaKnown RBP18.72■□□□□ 0.59
SNX3-201ENST00000230085 PELOQ9BRX2 385 aaKnown RBP18.72■□□□□ 0.59
SNX3-201ENST00000230085 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.72■□□□□ 0.59
SNX3-201ENST00000230085 MCCC2Q9HCC0 563 aa18.72■□□□□ 0.59
SNX3-201ENST00000230085 A0A0B4J203 849 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 CENPVL1A0A0U1RR11 272 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 ARPC1BO15143 372 aaKnown RBP18.71■□□□□ 0.59
SNX3-201ENST00000230085 FUT1P19526 365 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 SDHBP21912 280 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 PEBP1P30086 187 aaKnown RBP18.71■□□□□ 0.59
SNX3-201ENST00000230085 GPR3P46089 330 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 SIM1P81133 766 aaPredicted RBP18.71■□□□□ 0.59
SNX3-201ENST00000230085 NKAIN2Q5VXU1 208 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 ESPNLQ6ZVH7 1005 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 SLC35F2Q8IXU6 374 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 DNAAF1Q8NEP3 725 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 OR4E2Q8NGC2 313 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 OR6M1Q8NGM8 313 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 ST8SIA4Q92187 359 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 LINC00052Q96N35 136 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 OR14A2Q96R54 314 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 SERINC2Q96SA4 455 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 UCK1Q9HA47 277 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 TMEM27Q9HBJ8 222 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 DLL3Q9NYJ7 618 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 CYB5R1Q9UHQ9 305 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 AK6Q9Y3D8 172 aaKnown RBP18.71■□□□□ 0.59
SNX3-201ENST00000230085 WDFY3Q8IZQ1 3526 aa18.71■□□□□ 0.59
SNX3-201ENST00000230085 TRBV2A0A0J9YWF9 115 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 PIN1P1O15428 100 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 NDUFA2O43678 99 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 SUSD5O60279 629 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 PPP1R3DO95685 299 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 GP1BAP07359 652 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 GABRA1P14867 456 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 TUSC1Q2TAM9 212 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 TP53I3Q53FA7 332 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 SFRP4Q6FHJ7 346 aaPredicted RBP18.7■□□□□ 0.58
SNX3-201ENST00000230085 APOOLQ6UXV4 268 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 VN1R4Q7Z5H5 301 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 MEIOBQ8N635 442 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 ORAI1Q96D31 301 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 TM4SF19Q96DZ7 209 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 NMNAT2Q9BZQ4 307 aa18.7■□□□□ 0.58
SNX3-201ENST00000230085 DNTTIP1Q9H147 329 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms