RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 FZD7O75084 574 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 TFPIP10646 304 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 ZXDAP98168 799 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 INSM1Q01101 510 aaPredicted RBP17.28■□□□□ 0.36
YBX3-201ENST00000228251 C17orf67Q0P5P2 114 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 CBX3Q13185 183 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 LIPNQ5VXI9 398 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 TRIQKQ629K1 86 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 BMPERQ8N8U9 685 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 DUSP18Q8NEJ0 188 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 OR2I1PQ8NGU4 316 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 OR5H6Q8NGV6 325 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 IFI44Q8TCB0 444 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 TTC9Q92623 222 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 ZC3H10Q96K80 434 aaKnown RBP17.28■□□□□ 0.36
YBX3-201ENST00000228251 MMP28Q9H239 520 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 RBFOX1Q9NWB1 397 aaKnown RBP17.28■□□□□ 0.36
YBX3-201ENST00000228251 IGLV3-32A0A0A0MS00 114 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 A0A1W2PPK0 400 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 PRSS37A4D1T9 235 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 ZNF879B4DU55 563 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 C11orf98E9PRG8 122 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 AGRPO00253 132 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 NTN3O00634 580 aaPredicted RBP17.27■□□□□ 0.35
YBX3-201ENST00000228251 ARHGEF9O43307 516 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 TACSTD2P09758 323 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 PTGDSP41222 190 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 MAP2K3P46734 347 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 HSD17B12Q53GQ0 312 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 ZNF544Q6NX49 715 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 BPHLQ86WA6 291 aaPredicted RBP17.27■□□□□ 0.35
YBX3-201ENST00000228251 OR6F1Q8NGZ6 308 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 THAP3Q8WTV1 239 aaPredicted RBP17.27■□□□□ 0.35
YBX3-201ENST00000228251 TMEM234Q8WY98 164 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 SLC25A36Q96CQ1 311 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 DNAJA3Q96EY1 480 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 ADAD1Q96M93 576 aaKnown RBP17.27■□□□□ 0.35
YBX3-201ENST00000228251 KLHL15Q96M94 604 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 DERL3Q96Q80 235 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 AKIRIN1Q9H9L7 192 aaPredicted RBP17.27■□□□□ 0.35
YBX3-201ENST00000228251 NOX4Q9NPH5 578 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 B9D1Q9UPM9 204 aa17.27■□□□□ 0.35
YBX3-201ENST00000228251 TRBV5-5A0A0J9YX44 114 aa17.26■□□□□ 0.35
YBX3-201ENST00000228251 MEIOCA2RUB1 952 aa17.26■□□□□ 0.35
YBX3-201ENST00000228251 OR2T1O43869 369 aa17.26■□□□□ 0.35
YBX3-201ENST00000228251 AHSA1O95433 338 aa17.26■□□□□ 0.35
YBX3-201ENST00000228251 EGR3Q06889 387 aa17.26■□□□□ 0.35
YBX3-201ENST00000228251 ALKBH1Q13686 389 aaKnown RBP17.26■□□□□ 0.35
YBX3-201ENST00000228251 ZNF417Q8TAU3 575 aa17.26■□□□□ 0.35
YBX3-201ENST00000228251 ZNF587Q96SQ5 575 aaPredicted RBP17.26■□□□□ 0.35
YBX3-201ENST00000228251 GALNT9Q9HCQ5 603 aa17.26■□□□□ 0.35
YBX3-201ENST00000228251 FRRS1LQ9P0K9 344 aa17.26■□□□□ 0.35
YBX3-201ENST00000228251 WDR87Q6ZQQ6 2873 aa17.26■□□□□ 0.35
YBX3-201ENST00000228251 HSPB2A8KAH6 182 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 PATE3B3GLJ2 98 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 MEN1O00255 615 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 GPANK1O95872 356 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 TRAPPC2P0DI81 140 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 TRAPPC2BP0DI82 140 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 DAB2P98082 770 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 ZP4Q12836 540 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 SF3A2Q15428 464 aaKnown RBP17.25■□□□□ 0.35
YBX3-201ENST00000228251 HSPB2Q16082 182 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 SLC25A53Q5H9E4 307 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 OR5M10Q6IEU7 315 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 DPY19L4Q7Z388 723 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 C19orf18Q8NEA5 215 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 OTOSQ8NHW6 89 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 INTS14Q96SY0 518 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 AMELYQ99218 206 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 WACQ9BTA9 647 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 CRB3Q9BUF7 120 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 OR4C45A6NMZ5 311 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 D6RAR5 112 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 LYRM1O43325 122 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 LANCL1O43813 399 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 CFIP05156 583 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 SRMP19623 302 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 HOXD12P35452 270 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 PITPNBP48739 271 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 IL11RAQ14626 422 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 FDX2Q6P4F2 183 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 OR5L2Q8NGL0 311 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 OR6N2Q8NGY6 317 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 C8orf44Q96CB5 159 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 ABHD1Q96SE0 405 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 RNF121Q9H920 327 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 WDR54Q9H977 334 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 MRPL22Q9NWU5 206 aaKnown RBP17.25■□□□□ 0.35
YBX3-201ENST00000228251 MYOTQ9UBF9 498 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 AK6Q9Y3D8 172 aaKnown RBP17.25■□□□□ 0.35
YBX3-201ENST00000228251 PCDHGA9Q9Y5G4 932 aaKnown RBP17.25■□□□□ 0.35
YBX3-201ENST00000228251 TMEM14AQ9Y6G1 99 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 RALGAPA1Q6GYQ0 2036 aa17.25■□□□□ 0.35
YBX3-201ENST00000228251 A0A0B4J203 849 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 SLC22A23A1A5C7 686 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 C2orf72A6NCS6 295 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 ACOD1A6NK06 481 aa17.24■□□□□ 0.35
YBX3-201ENST00000228251 MS4A18H0YCH9 400 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms