RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 BRIX1Q8TDN6 353 aaKnown RBP16.95■□□□□ 0.3
CLIP2-201ENST00000223398 SLC25A43Q8WUT9 341 aaPredicted RBP16.95■□□□□ 0.3
CLIP2-201ENST00000223398 LIPHQ8WWY8 451 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 TAAR9Q96RI9 348 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 ZNF649Q9BS31 505 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 SGPP1Q9BX95 441 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 TMEM59Q9BXS4 323 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 HMGN4O00479 90 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 CXCL13O43927 109 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 COL9A1P20849 921 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 AGTR1P30556 359 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 PTGER4P35408 488 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 MLLT11Q13015 90 aaPredicted RBP16.94■□□□□ 0.3
CLIP2-201ENST00000223398 TCTN3Q6NUS6 607 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 FNDC9Q8TBE3 224 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 SNAPC5O75971 98 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 RPS25P62851 125 aaKnown RBP16.94■□□□□ 0.3
CLIP2-201ENST00000223398 RUNX2Q13950 521 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 AGAP6Q5VW22 663 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.94■□□□□ 0.3
CLIP2-201ENST00000223398 OR2A1Q8NGT9 310 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 CTSFQ9UBX1 484 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 UBQLN2Q9UHD9 624 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 EFSO43281 561 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 SC5DO75845 299 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 TNK1Q13470 666 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 PHC2Q8IXK0 858 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 MORN4Q8NDC4 146 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 MED18Q9BUE0 208 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 POMT2Q9UKY4 750 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 DOCK2Q92608 1830 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 DNAJB6O75190 326 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 ALDOBP05062 364 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 SNRPD2P62316 118 aaKnown RBP16.94■□□□□ 0.3
CLIP2-201ENST00000223398 KIF18BQ86Y91 864 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 ZNF454Q8N9F8 522 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 SARAFQ96BY9 339 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 CSF3RQ99062 836 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 MRI1Q9BV20 369 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 PRMT8Q9NR22 394 aaPredicted RBP16.94■□□□□ 0.3
CLIP2-201ENST00000223398 PAQR5Q9NXK6 330 aaPredicted RBP16.94■□□□□ 0.3
CLIP2-201ENST00000223398 PLA2G3Q9NZ20 509 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 NDUFAF4Q9P032 175 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 PIGLQ9Y2B2 252 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 IL7P13232 177 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 IDH3GP51553 393 aaPredicted RBP16.94■□□□□ 0.3
CLIP2-201ENST00000223398 LGALS4P56470 323 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 DMBX1Q8NFW5 382 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 DCLRE1CQ96SD1 692 aaKnown RBP16.94■□□□□ 0.3
CLIP2-201ENST00000223398 RGCCQ9H4X1 137 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 UFSP2Q9NUQ7 469 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 MED17Q9NVC6 651 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 PROCRQ9UNN8 238 aa16.94■□□□□ 0.3
CLIP2-201ENST00000223398 LRP5O75197 1615 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 D6RAR5 112 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 FCMRO60667 390 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 GPR176Q14439 515 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 ARHGAP11BQ3KRB8 267 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 SAXO2Q658L1 398 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 SLC22A25Q6T423 547 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 FAM71CQ8NEG0 241 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 FKRPQ9H9S5 495 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 GFOD1Q9NXC2 390 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 STEAP1Q9UHE8 339 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 SURF4O15260 269 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 HOXB5P09067 269 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 GPX2P18283 190 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 NFYBP25208 207 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 BLVRBP30043 206 aaPredicted RBP16.93■□□□□ 0.3
CLIP2-201ENST00000223398 EIF2S3LQ2VIR3 472 aaKnown RBP16.93■□□□□ 0.3
CLIP2-201ENST00000223398 AADACL3Q5VUY0 350 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 GJC3Q8NFK1 279 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 ADAMTS14Q8WXS8 1223 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 SMIM3Q9BZL3 60 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 CRISPLD2Q9H0B8 497 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 LAMB1P07942 1786 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 STMND1H3BQB6 276 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 SGCEO43556 437 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 FZD6O60353 706 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 MRPS14O60783 128 aaKnown RBP16.93■□□□□ 0.3
CLIP2-201ENST00000223398 MT-CO3P00414 261 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 TAS2R31P59538 309 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 IL13RA1P78552 427 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 HES1Q14469 280 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 NXNL2Q5VZ03 156 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.93■□□□□ 0.3
CLIP2-201ENST00000223398 M0R1B8 84 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 TUSC2O75896 110 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 FPR3P25089 353 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 PPICP45877 212 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 CLDN15P56746 228 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 HSF1Q00613 529 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 CYHR1Q6ZMK1 362 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 SFTPA1Q8IWL2 248 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 PELI3Q8N2H9 469 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 OR56B2PQ8NGI1 322 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 SNX18Q96RF0 628 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 PRRT1Q99946 306 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 UBQLN3Q9H347 655 aa16.93■□□□□ 0.3
CLIP2-201ENST00000223398 PCDHGA5Q9Y5G8 931 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms