RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 CT45A8P0DMV1 189 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 CT45A9P0DMV2 189 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 PPICP45877 212 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 OR1D5P58170 312 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 RASGEF1BQ0VAM2 473 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 POU4F3Q15319 338 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 CT45A2Q5DJT8 189 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 LRRC69Q6ZNQ3 347 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 CREB3L2Q70SY1 520 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 BTN2A1Q7KYR7 527 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 CCDC28AQ8IWP9 274 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 ZPLD1Q8TCW7 415 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 KISS1RQ969F8 398 aaPredicted RBP13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 KTI12Q96EK9 354 aaPredicted RBP13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 ELMOD3Q96FG2 381 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 ZC3HAV1LQ96H79 300 aaKnown RBP13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 LPAR4Q99677 370 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 SEC22CQ9BRL7 303 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 RDH8Q9NYR8 311 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 LAMA3Q16787 3333 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 ASXL3Q9C0F0 2248 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 A0A1B0GW55 424 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 C2orf72A6NCS6 295 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 NAP1L6A6NFF2 107 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 ARPC3O15145 178 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 DUX4L2P0CJ85 424 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 DUX4L3P0CJ86 424 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 DUX4L4P0CJ87 422 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 DUX4L5P0CJ88 424 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 DUX4L6P0CJ89 424 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 DUX4L7P0CJ90 424 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 CCR9P51686 369 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 ARPC4P59998 168 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 OC90Q02509 493 aaPredicted RBP13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 SNTA1Q13424 505 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 MELKQ14680 651 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 CD226Q15762 336 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 BCL2A1Q16548 175 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 CD276Q5ZPR3 534 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 GPAT4Q86UL3 456 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 GPER1Q99527 375 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 DUX4Q9UBX2 424 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 IFNA6P05013 189 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 HEXBP07686 556 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 PRSS3P35030 304 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 MMP15P51511 669 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 MGAT2Q10469 447 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 SMAD2Q15796 467 aaKnown RBP13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 ZNF74Q16587 644 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 NPEPL1Q8NDH3 523 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 OR7G1Q8NGA0 311 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 THRSPQ92748 146 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 YIPF5Q969M3 257 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 SLC19A3Q9BZV2 496 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 ELL3Q9HB65 397 aaPredicted RBP13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 CLEC1BQ9P126 229 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 UBQLN2Q9UHD9 624 aa13.63□□□□□ -0.23
UBE2D4-201ENST00000222402 SUSD5O60279 629 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 IGHV4-34P06331 123 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 CDK2P24941 298 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 CBFBQ13951 182 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 CDONQ4KMG0 1287 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 MRI1Q9BV20 369 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 UPB1Q9UBR1 384 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 A0A0B4J293 547 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 IGHV3-20A0A0C4DH32 117 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 FOXS1O43638 330 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 GPANK1O95872 356 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 OPN1LWP04000 364 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 WNT1P04628 370 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 H2BFMP0C1H6 154 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 ARRB1P49407 418 aaPredicted RBP13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 YOD1Q5VVQ6 348 aaPredicted RBP13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 KANSL1Q7Z3B3 1105 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 NR2C2APQ86WQ0 139 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 SMIM4Q8WVI0 70 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 HSD17B8Q92506 261 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 EMC7Q9NPA0 242 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 MMP25Q9NPA2 562 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 TMEM212A6NML5 194 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 PRAF2O60831 178 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 ZNF24P17028 368 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 NUDT1P36639 197 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 GLO1Q04760 184 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 STAC2Q6ZMT1 411 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 OR13C3Q8NGS6 347 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 CTHRC1Q96CG8 243 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 TMEM185BQ9H7F4 350 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 METTL7AQ9H8H3 244 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 RABL2AQ9UBK7 228 aaPredicted RBP13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 RABL2BQ9UNT1 228 aa13.62□□□□□ -0.23
UBE2D4-201ENST00000222402 GABARAPH6UMI1 98 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 ADAM11O75078 769 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 MRPS10P82664 201 aaKnown RBP13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 FLVCR1-AS1Q8TAF5 88 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 PGLYRP3Q96LB9 341 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 RBP7Q96R05 134 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 ST6GALNAC2Q9UJ37 374 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 KCNG2Q9UJ96 466 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms