RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 RDH10Q8IZV5 341 aa13.84□□□□□ -0.19
NDFIP2-201ENST00000218652 PXT1Q8NFP0 134 aa13.84□□□□□ -0.19
NDFIP2-201ENST00000218652 RBPMSQ93062 196 aaKnown RBP13.84□□□□□ -0.19
NDFIP2-201ENST00000218652 TM4SF18Q96CE8 201 aa13.84□□□□□ -0.19
NDFIP2-201ENST00000218652 ARPC5LQ9BPX5 153 aa13.84□□□□□ -0.19
NDFIP2-201ENST00000218652 WDR76Q9H967 626 aa13.84□□□□□ -0.19
NDFIP2-201ENST00000218652 EDIL3O43854 480 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 PRAMEF4O60810 478 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 MTHFD2P13995 350 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 ANXA7P20073 488 aaKnown RBP13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 BCKDHBP21953 392 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 DCAF7P61962 342 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 SLC35A2P78381 396 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 SLC14A2Q15849 920 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 OGFOD3Q6PK18 319 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 TMEM207Q6UWW9 146 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 CREB3L2Q70SY1 520 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 MED25Q71SY5 747 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 PELI3Q8N2H9 469 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 NRSN2Q9GZP1 204 aa13.83□□□□□ -0.19
NDFIP2-201ENST00000218652 A0A087WZY1 265 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 NPPBP16860 134 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 PRICKLE2Q7Z3G6 844 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 SPNS2Q8IVW8 549 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 ANKLE1Q8NAG6 615 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 CLEC1AQ8NC01 280 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 FAM71CQ8NEG0 241 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 TSSK2Q96PF2 358 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 NIPSNAP3BQ9BS92 247 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 FAM234AQ9H0X4 552 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 LTB4R2Q9NPC1 389 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 CGGBP1Q9UFW8 167 aaPredicted RBP13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 NPFFR2Q9Y5X5 522 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 A0A087WUU8 490 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 ZBTB42B2RXF5 422 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 SYT5O00445 386 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 CCSO14618 274 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 HCRTR1O43613 425 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 HOXC13P31276 330 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 CATR1Q13166 79 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 SEMA3BQ13214 749 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 ALKBH1Q13686 389 aaKnown RBP13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 GPR176Q14439 515 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 NPSR1Q6W5P4 371 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 CPEB2Q7Z5Q1 589 aaKnown RBP13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 FRMD1Q8N878 549 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 OR51S1Q8NGJ8 323 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 RASD2Q96D21 266 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 TAS2R5Q9NYW4 299 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 CACNA1GO43497 2377 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 PHF1O43189 567 aaPredicted RBP13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 PAPLNO95428 1278 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 ABHD16AO95870 558 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 ETV6P41212 452 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 ZNF684Q5T5D7 378 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 BRICD5Q6PL45 260 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 MFSD9Q8NBP5 474 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 ZBED3Q96IU2 234 aaPredicted RBP13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 PCDHB10Q9UN67 800 aa13.83□□□□□ -0.2
NDFIP2-201ENST00000218652 CPT2P23786 658 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 PHLDA2Q53GA4 152 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 ACTBL2Q562R1 376 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 MORN1Q5T089 497 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 RNLSQ5VYX0 342 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 H3F3CQ6NXT2 135 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 NKAIN4Q8IVV8 208 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 PIGTQ969N2 578 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 SAT2Q96F10 170 aaPredicted RBP13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 MUTYHQ9UIF7 546 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 TRIOBPQ9H2D6 2365 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 ANKRD61A6NGH8 418 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 TAPBPO15533 448 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 PMP2P02689 132 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 SMIM18P0DKX4 95 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 FPR3P25089 353 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 TRHRP34981 398 aaPredicted RBP13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 MFGE8Q08431 387 aaPredicted RBP13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 ANKRD34AQ69YU3 496 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 KCNJ15Q99712 375 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 SGPP1Q9BX95 441 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 C1QTNF3Q9BXJ4 246 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 CHST8Q9H2A9 424 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 CCL26Q9Y258 94 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 C2orf72A6NCS6 295 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 BHLHE40O14503 412 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 SCAF4O95104 1147 aaKnown RBP13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 LALBAP00709 142 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 TIMP1P01033 207 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 HBE1P02100 147 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 ZNF728P0DKX0 622 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 SRMP19623 302 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 NPBWR1P48145 328 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 NDUFA6P56556 154 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 RAB38P57729 211 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 RACK1P63244 317 aaKnown RBP13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 AVPI1Q5T686 147 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 SLC22A24Q8N4F4 322 aa13.82□□□□□ -0.2
NDFIP2-201ENST00000218652 ARRDC3Q96B67 414 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms