RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 OR4K13Q8NH42 304 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 C16orf58Q96GQ5 468 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 LOC390937A0A1W2PQ73 354 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 H0YIV9 168 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 GAPDHSO14556 408 aaPredicted RBP13.44□□□□□ -0.26
PTPRA-201ENST00000216877 NT5EP21589 574 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 IL13RA1P78552 427 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 TGM3Q08188 693 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 ACSM1Q08AH1 577 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 AMZ1Q400G9 498 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 CDK20Q8IZL9 346 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 NEURL3Q96EH8 262 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 SLC6A7Q99884 636 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 ZNF649Q9BS31 505 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 ZMIZ1Q9ULJ6 1067 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 AMDHD2Q9Y303 409 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 A0A1B0GWJ7 208 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 RNF222A6NCQ9 220 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 SMAD6O43541 496 aaKnown RBP13.44□□□□□ -0.26
PTPRA-201ENST00000216877 PPP1R3DO95685 299 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 ZNF385CQ66K41 422 aaPredicted RBP13.44□□□□□ -0.26
PTPRA-201ENST00000216877 ZNF620Q6ZNG0 422 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 ZNF280BQ86YH2 543 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 OR5P2Q8WZ92 322 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 AMDHD1Q96NU7 426 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 GAL3ST4Q96RP7 486 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 BRF2Q9HAW0 419 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 KCNIP3Q9Y2W7 256 aa13.44□□□□□ -0.26
PTPRA-201ENST00000216877 PDCD11Q14690 1871 aaKnown RBP13.44□□□□□ -0.26
PTPRA-201ENST00000216877 CTDSPLO15194 276 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 TBL1XO60907 577 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 MOSPD3O75425 235 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 HSD3B2P26439 372 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 TRHRP34981 398 aaPredicted RBP13.43□□□□□ -0.26
PTPRA-201ENST00000216877 NKX6-1P78426 367 aaPredicted RBP13.43□□□□□ -0.26
PTPRA-201ENST00000216877 DHRS2Q13268 280 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 PHYHIPLQ96FC7 376 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 CAMK1GQ96NX5 476 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 INTS14Q96SY0 518 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 KATNBL1Q9H079 304 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 A4GALTQ9NPC4 353 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 USP36Q9P275 1121 aaKnown RBP13.43□□□□□ -0.26
PTPRA-201ENST00000216877 SPAG17Q6Q759 2223 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 NPIPB15A6NHN6 443 aaPredicted RBP13.43□□□□□ -0.26
PTPRA-201ENST00000216877 FGF19O95750 216 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 ATP1B2P14415 290 aaPredicted RBP13.43□□□□□ -0.26
PTPRA-201ENST00000216877 EFNB1P98172 346 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 FZD5Q13467 585 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 STPG1Q5TH74 334 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 PWWP2BQ6NUJ5 590 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 CCDC116Q8IYX3 515 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 APOBEC4Q8WW27 367 aaKnown RBP13.43□□□□□ -0.26
PTPRA-201ENST00000216877 CXorf40BQ96DE9 158 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 IL17FQ96PD4 163 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 POTEKPQ9BYX7 375 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 SEMA6CQ9H3T2 930 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 DMRT3Q9NQL9 472 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 RNF186Q9NXI6 227 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 IKZF2Q9UKS7 526 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 PLAGL1Q9UM63 463 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 DNAJC25-GNG10A0A024R161 153 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 POP4O95707 220 aaKnown RBP13.43□□□□□ -0.26
PTPRA-201ENST00000216877 TSPAN15O95858 294 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 PRH1P02810 166 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 CHRM4P08173 479 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 CSF1P09603 554 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 CKBP12277 381 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 RCC1P18754 421 aaPredicted RBP13.43□□□□□ -0.26
PTPRA-201ENST00000216877 GALP22466 123 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 TBPL1P62380 186 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 BDH1Q02338 343 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 CSRP2Q16527 193 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 ZNF750Q32MQ0 723 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 ARTNQ5T4W7 220 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 GFI1BQ5VTD9 330 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 PRSS58Q8IYP2 241 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 FATE1Q969F0 183 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 SLC41A3Q96GZ6 507 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 PGLYRP3Q96LB9 341 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 HS6ST2Q96MM7 605 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 RIOK2Q9BVS4 552 aaKnown RBP13.43□□□□□ -0.26
PTPRA-201ENST00000216877 DOK5Q9P104 306 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 PIAS3Q9Y6X2 628 aa13.43□□□□□ -0.26
PTPRA-201ENST00000216877 UNC119BA6NIH7 251 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 BLOC1S5-TXNDC5H3BN57 136 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 PMS2P2O95744 297 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 IFNA10P01566 189 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 AGAP20933 346 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 CORO1AP31146 461 aaKnown RBP13.42□□□□□ -0.26
PTPRA-201ENST00000216877 ARHGAP40Q5TG30 622 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 TPGS1Q6ZTW0 290 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 OR13C2Q8NGS9 318 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 AHSPQ9NZD4 102 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 VSX1Q9NZR4 365 aaPredicted RBP13.42□□□□□ -0.26
PTPRA-201ENST00000216877 A0A087WZY1 265 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 OR2C1O95371 312 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 GNG10P50151 68 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 B4GALNT1Q00973 533 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 ERV3-1Q14264 604 aa13.42□□□□□ -0.26
PTPRA-201ENST00000216877 BATFQ16520 125 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms