RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 HIST1H2ACQ93077 130 aa15.3■□□□□ 0.04
CTDP1-201ENST00000075430 RXFP3Q9NSD7 469 aa15.3■□□□□ 0.04
CTDP1-201ENST00000075430 TBC1D29Q9UFV1 150 aa15.3■□□□□ 0.04
CTDP1-201ENST00000075430 FADS1O60427 444 aa15.3■□□□□ 0.04
CTDP1-201ENST00000075430 CTXN1P60606 82 aa15.3■□□□□ 0.04
CTDP1-201ENST00000075430 BDH1Q02338 343 aa15.3■□□□□ 0.04
CTDP1-201ENST00000075430 TRAM1Q15629 374 aa15.3■□□□□ 0.04
CTDP1-201ENST00000075430 ARHGAP11AQ6P4F7 1023 aa15.3■□□□□ 0.04
CTDP1-201ENST00000075430 CMKLR1Q99788 373 aa15.3■□□□□ 0.04
CTDP1-201ENST00000075430 MKKSQ9NPJ1 570 aaPredicted RBP15.3■□□□□ 0.04
CTDP1-201ENST00000075430 NPDC1Q9NQX5 325 aaPredicted RBP15.3■□□□□ 0.04
CTDP1-201ENST00000075430 PRR13Q9NZ81 148 aa15.3■□□□□ 0.04
CTDP1-201ENST00000075430 LAMP5Q9UJQ1 280 aa15.3■□□□□ 0.04
CTDP1-201ENST00000075430 ADAM29Q9UKF5 820 aa15.3■□□□□ 0.04
CTDP1-201ENST00000075430 RDH16O75452 317 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 TGM6O95932 706 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 RD3LP0DJH9 198 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 POU3F4P49335 361 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 SDR16C5Q8N3Y7 309 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 RGP1Q92546 391 aaPredicted RBP15.29■□□□□ 0.04
CTDP1-201ENST00000075430 WDR13Q9H1Z4 485 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 WDR76Q9H967 626 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 LRIT1Q9P2V4 623 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 KIF25Q9UIL4 384 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.29■□□□□ 0.04
CTDP1-201ENST00000075430 C5orf51A6NDU8 294 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 EIF1AYO14602 144 aaKnown RBP15.29■□□□□ 0.04
CTDP1-201ENST00000075430 PRAF2O60831 178 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 CTSBP07858 339 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 OR2T7P0C7T2 308 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 AKR1C4P17516 323 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 EIF2B1Q14232 305 aaKnown RBP15.29■□□□□ 0.04
CTDP1-201ENST00000075430 PRAMEF17Q5VTA0 474 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 OLFML2AQ68BL7 652 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 ZNF626Q68DY1 528 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 PRR22Q8IZ63 422 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 OR2T27Q8NH04 317 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 MRPS24Q96EL2 167 aaKnown RBP15.29■□□□□ 0.04
CTDP1-201ENST00000075430 C12orf57Q99622 126 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 PARP12Q9H0J9 701 aaKnown RBP15.29■□□□□ 0.04
CTDP1-201ENST00000075430 SLC6A15Q9H2J7 730 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 FGF22Q9HCT0 170 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 ANKRD10Q9NXR5 420 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 KANTRA0A1W2PQU2 76 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 DPP4P27487 766 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 MAT1AQ00266 395 aaKnown RBP15.29■□□□□ 0.04
CTDP1-201ENST00000075430 STEAP2Q8NFT2 490 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 CFAP54Q96N23 3096 aa15.29■□□□□ 0.04
CTDP1-201ENST00000075430 FREM3P0C091 2139 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 A0A0A6YYC8 382 aaPredicted RBP15.28■□□□□ 0.04
CTDP1-201ENST00000075430 POM121BA6NF01 834 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 I3L1I5 382 aaPredicted RBP15.28■□□□□ 0.04
CTDP1-201ENST00000075430 CSTAP01040 98 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 AVPR2P30518 371 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 GJA4P35212 333 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 FAUP35544 74 aaKnown RBP15.28■□□□□ 0.04
CTDP1-201ENST00000075430 EIF1AXP47813 144 aaKnown RBP15.28■□□□□ 0.04
CTDP1-201ENST00000075430 PSMD4P55036 377 aaKnown RBP15.28■□□□□ 0.04
CTDP1-201ENST00000075430 ACTA2P62736 377 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 ACTG2P63267 376 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 KDM8Q8N371 416 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 FBXO17Q96EF6 278 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 SLC6A7Q99884 636 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 DPYSL5Q9BPU6 564 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 MAFFQ9ULX9 164 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 CDC14CA4D256 554 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 NDUFB6O95139 128 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 DCNP07585 359 aaKnown RBP15.28■□□□□ 0.04
CTDP1-201ENST00000075430 PBX2P40425 430 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 CDKN2AP42771 156 aaKnown RBP15.28■□□□□ 0.04
CTDP1-201ENST00000075430 SPOCK1Q08629 439 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 GUCA2BQ16661 112 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 ARHGAP11BQ3KRB8 267 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 ACBD4Q8NC06 268 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 RPP25Q9BUL9 199 aaKnown RBP15.28■□□□□ 0.04
CTDP1-201ENST00000075430 CYB5R1Q9UHQ9 305 aa15.28■□□□□ 0.04
CTDP1-201ENST00000075430 ANKRD20A5PA0PJZ0 165 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 TMEM200CA6NKL6 621 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 PRAMEF2O60811 474 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 ALOX12BO75342 701 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 DUSP8Q13202 625 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 MLC1Q15049 377 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 RBMS2Q15434 407 aaKnown RBP15.27■□□□□ 0.04
CTDP1-201ENST00000075430 MDGA2Q7Z553 956 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 CDH26Q8IXH8 852 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 MOAP1Q96BY2 351 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 LINC00615Q96LM1 132 aaPredicted RBP15.27■□□□□ 0.04
CTDP1-201ENST00000075430 SYT4Q9H2B2 425 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 A0A1B0GV50 99 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 CARNS1A5YM72 827 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 TBX19O60806 448 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 RAB3DO95716 219 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 PPP1CAP62136 330 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 HTRA4P83105 476 aaPredicted RBP15.27■□□□□ 0.04
CTDP1-201ENST00000075430 RUNX3Q13761 415 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 OR1J2Q8NGS2 313 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 OR4C3Q8NH37 302 aa15.27■□□□□ 0.04
CTDP1-201ENST00000075430 VRK1Q99986 396 aaPredicted RBP15.27■□□□□ 0.04
CTDP1-201ENST00000075430 C7orf50Q9BRJ6 194 aaKnown RBP15.27■□□□□ 0.04
CTDP1-201ENST00000075430 NKX6-2Q9C056 277 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms