RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 CCDC28AQ8IWP9 274 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 LMX1AQ8TE12 382 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 ELMOD3Q96FG2 381 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 KCNG2Q9UJ96 466 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 CDV3Q9UKY7 258 aaKnown RBP7.54□□□□□ -1.2
CDC27-201ENST00000066544 NPIPB9F8W1W9 429 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 HIST1H2ABP04908 130 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 UBL4AP11441 157 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 MYF5P13349 255 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 LCN1P31025 176 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 YPEL5P62699 121 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 ZNF141Q15928 474 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 HIST3H2AQ7L7L0 130 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 SLC35F3Q8IY50 421 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 HIST1H2ACQ93077 130 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 KLHDC7BQ96G42 594 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 MSANTD3Q96H12 275 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 POLE3Q9NRF9 147 aa7.54□□□□□ -1.2
CDC27-201ENST00000066544 SPTY2D1-AS1A0A0U1RR47 76 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 EFCAB7A8K855 629 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 MST1P26927 711 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 CCKBRP32239 447 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 RABIFP47224 123 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 P2RX1P51575 399 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 EFNB2P52799 333 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 HSF2Q03933 536 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 CBFBQ13951 182 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 GRK1Q15835 563 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 ZNF74Q16587 644 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 MDGA2Q7Z553 956 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 ZNF224Q9NZL3 707 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 SCML1Q9UN30 329 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 CLDN16Q9Y5I7 305 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 IGHV5-51A0A0C4DH38 117 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 PRAMEF26H0Y7S4 382 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 ARPC3O15145 178 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 GPRIN2O60269 458 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 SULT1A3P0DMM9 295 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 SULT1A4P0DMN0 295 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 DPP4P27487 766 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 PTH2RP49190 550 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 ART1P52961 327 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 ZP2Q05996 745 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 SMAD2Q15796 467 aaKnown RBP7.53□□□□□ -1.2
CDC27-201ENST00000066544 ETFDHQ16134 617 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 MEP1BQ16820 701 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 DEFB133Q30KQ1 61 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 TCTE1Q5JU00 501 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 C1orf189Q5VU69 101 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 LINC00114Q6XXX2 140 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 TMEM184AQ6ZMB5 413 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 C16orf47Q6ZP98 133 aaPredicted RBP7.53□□□□□ -1.2
CDC27-201ENST00000066544 TEX19Q8NA77 164 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 THAP3Q8WTV1 239 aaPredicted RBP7.53□□□□□ -1.2
CDC27-201ENST00000066544 FAM131CQ96AQ9 280 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 LRRC61Q9BV99 259 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 TRAV18A0A075B6X5 111 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 MEIKINA0A087WXM9 373 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 PDCD5O14737 125 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 UTS2O95399 124 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 TAS2R20P59543 309 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 EGR4Q05215 589 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 ALKBH1Q13686 389 aaKnown RBP7.53□□□□□ -1.2
CDC27-201ENST00000066544 Q499Y3 187 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 ESCO2Q56NI9 601 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 MARCH3Q86UD3 253 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 OR1F2PQ96R84 312 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 ZNF436Q9C0F3 470 aaPredicted RBP7.53□□□□□ -1.2
CDC27-201ENST00000066544 MMP25Q9NPA2 562 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 TMEM138Q9NPI0 162 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 COPZ2Q9P299 210 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 PCDHGA5Q9Y5G8 931 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 M0R233 179 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 CSN2P05814 226 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 HOXC4P09017 264 aaPredicted RBP7.53□□□□□ -1.2
CDC27-201ENST00000066544 SPARCP09486 303 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 NR0B1P51843 470 aaKnown RBP7.53□□□□□ -1.2
CDC27-201ENST00000066544 AP2S1P53680 142 aaPredicted RBP7.53□□□□□ -1.2
CDC27-201ENST00000066544 PRPS1P60891 318 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 HTR4Q13639 388 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 PCGF3Q3KNV8 242 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 CHRDL2Q6WN34 429 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 TMEM151BQ8IW70 566 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 LRRC20Q8TCA0 184 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 TAAR8Q969N4 342 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 NXPE2Q96DL1 559 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 MRPL48Q96GC5 212 aaKnown RBP7.53□□□□□ -1.2
CDC27-201ENST00000066544 A0A1B0GVI7 797 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 CDC40O60508 579 aaKnown RBP eCLIP7.53□□□□□ -1.2
CDC27-201ENST00000066544 OR6A2O95222 327 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 CD1CP29017 333 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 PSMA6P60900 246 aaKnown RBP7.53□□□□□ -1.2
CDC27-201ENST00000066544 PRTGQ2VWP7 1150 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 MESTQ5EB52 335 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 VWA2Q5GFL6 755 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 WBP2NLQ6ICG8 309 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 OR7E24Q6IFN5 339 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 PLPP7Q8NBV4 271 aa7.53□□□□□ -1.2
CDC27-201ENST00000066544 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.53□□□□□ -1.2
CDC27-201ENST00000066544 HEXA-AS1Q9H8Q6 139 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms