RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TSPAN4O14817 238 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 FOLR1P15328 257 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 ANXA7P20073 488 aaKnown RBP11.94□□□□□ -0.5
CTNS-201ENST00000046640 ACTC1P68032 377 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 ACTA1P68133 377 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 CFHR1Q03591 330 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 HSF2Q03933 536 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 EGR4Q05215 589 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 GRK1Q15835 563 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 DPY19L2P2Q6ZN68 376 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 PXKQ7Z7A4 578 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 LSM14AQ8ND56 463 aaKnown RBP11.94□□□□□ -0.5
CTNS-201ENST00000046640 SLC2A12Q8TD20 617 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 SORCS2Q96PQ0 1159 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.94□□□□□ -0.5
CTNS-201ENST00000046640 TSPAN10Q9H1Z9 355 aaPredicted RBP11.94□□□□□ -0.5
CTNS-201ENST00000046640 NRIP3Q9NQ35 241 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 SLC2A4RGQ9NR83 387 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 RDH8Q9NYR8 311 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 PRODH2Q9UF12 536 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 UBQLN2Q9UHD9 624 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 CNTRLQ7Z7A1 2325 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 M0R233 179 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 ZNF264O43296 627 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 OR2T7P0C7T2 308 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 OR8G3PP0DMU2 310 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 BCKDHBP21953 392 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 LCN1P31025 176 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 DIO1P49895 249 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 MMP15P51511 669 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 RAB14P61106 215 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 PITPNAQ00169 270 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 CDK5R1Q15078 307 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 HSD17B12Q53GQ0 312 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 ALG10Q5BKT4 473 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 SLC51BQ86UW2 128 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 JAZF1Q86VZ6 243 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 DNAAF1Q8NEP3 725 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 OR2T27Q8NH04 317 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 OR8K3Q8NH51 312 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 OR1L3Q8NH93 324 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 ALG12Q9BV10 488 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 NUDT9Q9BW91 350 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 ZNF436Q9C0F3 470 aaPredicted RBP11.93□□□□□ -0.5
CTNS-201ENST00000046640 HAO2Q9NYQ3 351 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 MGAT4CQ9UBM8 478 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 PCNX3Q9H6A9 2034 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 GLULP15104 373 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 CENPAP49450 140 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 PSMD4P55036 377 aaKnown RBP11.93□□□□□ -0.5
CTNS-201ENST00000046640 NANOS3P60323 173 aaKnown RBP11.93□□□□□ -0.5
CTNS-201ENST00000046640 UBE2MP61081 183 aaKnown RBP11.93□□□□□ -0.5
CTNS-201ENST00000046640 RPS15P62841 145 aaKnown RBP11.93□□□□□ -0.5
CTNS-201ENST00000046640 PUDPQ08623 228 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 SKP2Q13309 424 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 BTN2A1Q7KYR7 527 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 MS4A15Q8N5U1 240 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 OR52B4Q8NGK2 314 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 FAM174AQ8TBP5 190 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 ZDHHC12Q96GR4 267 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 DPYSL5Q9BPU6 564 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 MKL2Q9ULH7 1088 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 ICAM5Q9UMF0 924 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 KLHDC2Q9Y2U9 406 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 ASCC3Q8N3C0 2202 aaKnown RBP11.93□□□□□ -0.5
CTNS-201ENST00000046640 MEIKINA0A087WXM9 373 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 LINC00862A6NCI5 91 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 SIX6O95475 246 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 IFNA7P01567 189 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 GAAP10253 952 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 GALP22466 123 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 PTGS2P35354 604 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 TAS2R43P59537 309 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 RPS11P62280 158 aaKnown RBP eCLIP11.93□□□□□ -0.5
CTNS-201ENST00000046640 KLF9Q13886 244 aaPredicted RBP11.93□□□□□ -0.5
CTNS-201ENST00000046640 ZNF74Q16587 644 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 AANATQ16613 207 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 COL28A1Q2UY09 1125 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 C14orf28Q4W4Y0 310 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 TCTE1Q5JU00 501 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 WBP2NLQ6ICG8 309 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 LANCL3Q6ZV70 420 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 GALNT11Q8NCW6 608 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 SMIM19Q96E16 107 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 LPAR4Q99677 370 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 PHF7Q9BWX1 381 aaPredicted RBP11.93□□□□□ -0.5
CTNS-201ENST00000046640 HRASLSQ9HDD0 168 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 CA10Q9NS85 328 aa11.93□□□□□ -0.5
CTNS-201ENST00000046640 TNRC18O15417 2968 aaPredicted RBP11.92□□□□□ -0.5
CTNS-201ENST00000046640 TMEM131Q92545 1883 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 PPM1BO75688 479 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 SC5DO75845 299 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 SULT1A3P0DMM9 295 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 SULT1A4P0DMN0 295 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 ATF4P18848 351 aaPredicted RBP11.92□□□□□ -0.5
CTNS-201ENST00000046640 POU3F2P20265 443 aaPredicted RBP11.92□□□□□ -0.5
CTNS-201ENST00000046640 RORAP35398 523 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 CCR9P51686 369 aa11.92□□□□□ -0.5
CTNS-201ENST00000046640 HNRNPKP61978 463 aaKnown RBP eCLIP11.92□□□□□ -0.54e-6■■■■□ 20.3
CTNS-201ENST00000046640 LGALS3BPQ08380 585 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms