RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 HIDE1A8MVS5 230 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 C11orf98E9PRG8 122 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 LEFTY1O75610 366 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 C1QBP02746 253 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF8P17098 575 aaPredicted RBP5.65□□□□□ -1.51
VPS13D-201ENST00000011700 PCMT1P22061 227 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 ASCL1P50553 236 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 UBE2G1P62253 170 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 ERVK-25P63136 954 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 DGKZQ13574 1117 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 SOWAHCQ53LP3 525 aaPredicted RBP5.65□□□□□ -1.51
VPS13D-201ENST00000011700 PLCXD3Q63HM9 321 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 OR6Q1Q8NGQ2 317 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 OR13C4Q8NGS5 318 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 GATA6Q92908 595 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 SENP5Q96HI0 755 aaPredicted RBP5.65□□□□□ -1.51
VPS13D-201ENST00000011700 MBOAT4Q96T53 435 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 ATP5SQ99766 215 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 DMRT3Q9NQL9 472 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 FOXJ3Q9UPW0 622 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 A0A1W2PRU2 124 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 TCRBV7S2A1N4TA0A589 114 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 SERPINE3A8MV23 424 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 B4DEV8 164 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 OR2C1O95371 312 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 FPR3P25089 353 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF93P35789 620 aaPredicted RBP5.65□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF154Q13106 437 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 TOMM34Q15785 309 aaPredicted RBP5.65□□□□□ -1.51
VPS13D-201ENST00000011700 PRAMEF19Q5SWL8 479 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 B3GNTL1Q67FW5 361 aaPredicted RBP5.65□□□□□ -1.51
VPS13D-201ENST00000011700 ERASQ7Z444 233 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 OR9I1Q8NGQ6 314 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 PHOSPHO2Q8TCD6 241 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 NDRG1Q92597 394 aaKnown RBP5.65□□□□□ -1.51
VPS13D-201ENST00000011700 RPL10LQ96L21 214 aaKnown RBP5.65□□□□□ -1.51
VPS13D-201ENST00000011700 FER1L6-AS2Q96M78 137 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 RBM24Q9BX46 236 aaKnown RBP5.65□□□□□ -1.51
VPS13D-201ENST00000011700 WDR61Q9GZS3 305 aaKnown RBP5.65□□□□□ -1.51
VPS13D-201ENST00000011700 TM7SF3Q9NS93 570 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 STARD5Q9NSY2 213 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 HIF1ANQ9NWT6 349 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 KIAA1456Q9P272 454 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF107Q9UII5 783 aaPredicted RBP5.65□□□□□ -1.51
VPS13D-201ENST00000011700 CPMP14384 443 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 HNRNPA2B1P22626 353 aaKnown RBP5.65□□□□□ -1.51
VPS13D-201ENST00000011700 OPRL1P41146 370 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 C2orf27AQ580R0 203 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 SSX7Q7RTT5 188 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 CARFQ8N187 725 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 MED9Q9NWA0 146 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 PLXNA2O75051 1894 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 VNN1O95497 513 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 H2AFB1P0C5Y9 115 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 CLINT1Q14677 625 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 PGGHGQ32M88 737 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 FIGLAQ6QHK4 219 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 MAMDC4Q6UXC1 1216 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 NPSR1Q6W5P4 371 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 OR4Q3Q8NH05 313 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 SGCZQ96LD1 299 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 DIRC2Q96SL1 478 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 EGLN3Q9H6Z9 239 aa5.65□□□□□ -1.51
VPS13D-201ENST00000011700 ATP1B1P05026 303 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 FOLR1P15328 257 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 COX5AP20674 150 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 IDUAP35475 653 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ARR3P36575 388 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 RPS19P39019 145 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 KCNJ3P48549 501 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ERHP84090 104 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 DESI1Q6ICB0 168 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ISCA2Q86U28 154 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF573Q86YE8 665 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 GLIS3Q8NEA6 775 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 OR5M3Q8NGP4 307 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 OR10K1Q8NGX5 313 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 PAQR8Q8TEZ7 354 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 OR5B2Q96R09 309 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 NKX6-2Q9C056 277 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 GPR173Q9NS66 373 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 PCDHGA6Q9Y5G7 932 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 SLC5A10A0PJK1 596 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 CBLP22681 906 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 APOBEC1P41238 236 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 GPR4P46093 362 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 DHODHQ02127 395 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF439Q8NDP4 499 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 SDR9C7Q8NEX9 313 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 OR13C2Q8NGS9 318 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 RTP3Q9BQQ7 232 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 KCTD3Q9Y597 815 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 TMEM269A0A1B0GVZ9 245 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 FGF18O76093 207 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 OPN1SWP03999 348 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 NID1P14543 1247 aa5.64□□□□□ -1.51
VPS13D-201ENST00000011700 HIST1H1BP16401 226 aaKnown RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 HOXA1P49639 335 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-201ENST00000011700 ZP2Q05996 745 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms