RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 FBXW5Q969U6 566 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 SLC22A18Q96BI1 424 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 CMTM3Q96MX0 182 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 AMELYQ99218 206 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 SHARPINQ9H0F6 387 aa12.77□□□□□ -0.36
USH1C-201ENST00000005226 MYEF2Q9P2K5 600 aaKnown RBP12.77□□□□□ -0.36
USH1C-201ENST00000005226 MYO15AQ9UKN7 3530 aa12.77□□□□□ -0.37
USH1C-201ENST00000005226 A0A087WUJ7 227 aa12.77□□□□□ -0.37
USH1C-201ENST00000005226 TMEM272A0A1B0GTI8 110 aa12.77□□□□□ -0.37
USH1C-201ENST00000005226 DOK2O60496 412 aa12.77□□□□□ -0.37
USH1C-201ENST00000005226 RP2O75695 350 aa12.77□□□□□ -0.37
USH1C-201ENST00000005226 ICAM2P13598 275 aa12.77□□□□□ -0.37
USH1C-201ENST00000005226 GABRA1P14867 456 aa12.77□□□□□ -0.37
USH1C-201ENST00000005226 ZNF10P21506 573 aaPredicted RBP12.77□□□□□ -0.37
USH1C-201ENST00000005226 CTXN1P60606 82 aa12.77□□□□□ -0.37
USH1C-201ENST00000005226 ILF3Q12906 894 aaKnown RBP eCLIP12.77□□□□□ -0.37
USH1C-201ENST00000005226 HDDC2Q7Z4H3 204 aa12.77□□□□□ -0.37
USH1C-201ENST00000005226 FAM60AQ9NP50 221 aa12.77□□□□□ -0.37
USH1C-201ENST00000005226 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.77□□□□□ -0.37
USH1C-201ENST00000005226 ZNF230Q9UIE0 474 aaPredicted RBP12.77□□□□□ -0.37
USH1C-201ENST00000005226 FBXL21Q9UKT6 434 aa12.77□□□□□ -0.37
USH1C-201ENST00000005226 IGKV1D-42A0A075B6H8 117 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 TNFSF14O43557 240 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 SULT1B1O43704 296 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 AK1P00568 194 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 APODP05090 189 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 RAB40ALP0C0E4 278 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 CTRB1P17538 263 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 BTG2P78543 158 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 FAM74A1Q5RGS3 127 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 CTRB2Q6GPI1 263 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 ZCCHC12Q6PEW1 402 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 DPY19L4Q7Z388 723 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 JAZF1Q86VZ6 243 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 ZNF676Q8N7Q3 588 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 BOLLQ8N9W6 283 aaKnown RBP12.76□□□□□ -0.37
USH1C-201ENST00000005226 LSM14AQ8ND56 463 aaKnown RBP12.76□□□□□ -0.37
USH1C-201ENST00000005226 RAB40AQ8WXH6 277 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 TMEM106AQ96A25 262 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 PNPLA2Q96AD5 504 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 C3orf49Q96BT1 292 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 SLITRK2Q9H156 845 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 EXOSC3Q9NQT5 275 aaKnown RBP12.76□□□□□ -0.37
USH1C-201ENST00000005226 A0A0A6YYC8 382 aaPredicted RBP12.76□□□□□ -0.37
USH1C-201ENST00000005226 C17orf51A8MQB3 221 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 I3L1I5 382 aaPredicted RBP12.76□□□□□ -0.37
USH1C-201ENST00000005226 PLRG1O43660 514 aaKnown RBP12.76□□□□□ -0.37
USH1C-201ENST00000005226 AKR7A3O95154 331 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 CD3DP04234 171 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 IFNA16P05015 189 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 IL5P05113 134 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 CALCBP10092 127 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 GTF2F2P13984 249 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 FNTBP49356 437 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 PRMT2P55345 433 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 DLX5P56178 289 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 C1orf53Q5VUE5 145 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 C11orf88Q6PI97 169 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 POMZP3Q6PJE2 187 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 GSG1LQ6UXU4 331 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 METTL27Q8N6F8 245 aaPredicted RBP12.76□□□□□ -0.37
USH1C-201ENST00000005226 OR2AK2Q8NG84 335 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 OR6N2Q8NGY6 317 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 DUSP19Q8WTR2 217 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 TNFAIP8L1Q8WVP5 186 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 CCDC74AQ96AQ1 378 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 GAS2L1Q99501 681 aaPredicted RBP12.76□□□□□ -0.37
USH1C-201ENST00000005226 HRASLS2Q9NWW9 162 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 GTF2A1LQ9UNN4 478 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 ZNF337Q9Y3M9 751 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 RWDD3Q9Y3V2 267 aa12.76□□□□□ -0.37
USH1C-201ENST00000005226 SNRPGP15A8MWD9 76 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 RLN2P04090 185 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 CD1AP06126 327 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 COL9A1P20849 921 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 ENPP2Q13822 863 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 ZNHIT3Q15649 155 aaPredicted RBP12.75□□□□□ -0.37
USH1C-201ENST00000005226 C4orf46Q504U0 113 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 ZNF660Q6AZW8 331 aaPredicted RBP12.75□□□□□ -0.37
USH1C-201ENST00000005226 SCARB1Q8WTV0 552 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 SCARF2Q96GP6 870 aaPredicted RBP12.75□□□□□ -0.37
USH1C-201ENST00000005226 PFDN2Q9UHV9 154 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 OR10H1Q9Y4A9 318 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 UBE2QL1A1L167 161 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 F5H5P2 479 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 H7C417 338 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 KCNJ13O60928 360 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 C4BPBP20851 252 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 GDI1P31150 447 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 VEGFBP49765 207 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 GPR143P51810 404 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 IL10RAQ13651 578 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 CBLN3Q6UW01 205 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 RTL10Q7L3V2 364 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 ZNF550Q7Z398 422 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 FAM220AQ7Z4H9 259 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 ZNF454Q8N9F8 522 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 OR52H1Q8NGJ2 320 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 OR1S1Q8NH92 325 aa12.75□□□□□ -0.37
USH1C-201ENST00000005226 RPS4Y2Q8TD47 263 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms