RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001	SMAD9	O15198	467 aa	Known RBP	7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	GATB	O75879	557 aa	Known RBP	7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	GPANK1	O95872	356 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	S100A1	P23297	94 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	HTR3A	P46098	478 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	ZNF85	Q03923	595 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	ZNF117	Q03924	483 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	HSF2	Q03933	536 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	GLO1	Q04760	184 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	MEP1B	Q16820	701 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	COL28A1	Q2UY09	1125 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	GLYR1	Q49A26	553 aa	Predicted RBP	7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	SLC35D3	Q5M8T2	416 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	PRAMEF20	Q5VT98	475 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	C1orf140	Q5VVS0	124 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	LRRC69	Q6ZNQ3	347 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	SLC43A2	Q8N370	569 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	DNAAF1	Q8NEP3	725 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	IL17RD	Q8NFM7	739 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	CADM4	Q8NFZ8	388 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	OR6N1	Q8NGY5	312 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	ZNF417	Q8TAU3	575 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	SLC22A8	Q8TCC7	542 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	SMIM19	Q96E16	107 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	OR5B2	Q96R09	309 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	ZNF587	Q96SQ5	575 aa	Predicted RBP	7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	TMEM43	Q9BTV4	400 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	VN1R1	Q9GZP7	353 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	WWTR1	Q9GZV5	400 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	RNF32	Q9H0A6	362 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	ATG5	Q9H1Y0	275 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	GPN1	Q9HCN4	374 aa	Predicted RBP	7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	FSCN3	Q9NQT6	498 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	EIF3K	Q9UBQ5	218 aa	Known RBP	7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	MKI67	P46013	3256 aa	Known RBP	7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	HELZ	P42694	1942 aa	Known RBP	7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	DCDC2B	A2VCK2	349 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	MEIS3P1	A6NDR6	274 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	TGFBR3L	H3BV60	316 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	TLX3	O43711	291 aa	Predicted RBP	7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	SRM	P19623	302 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	SDHB	P21912	280 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	KIR2DL3	P43628	341 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	PRKX	P51817	358 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	EFR3A	Q14156	821 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	ACKR1	Q16570	336 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	TMEM91	Q6ZNR0	172 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	SLC16A9	Q7RTY1	509 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	PIAS4	Q8N2W9	510 aa	Predicted RBP	7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	RFLNB	Q8N5W9	214 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	CEP76	Q8TAP6	659 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	CTHRC1	Q96CG8	243 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	MVB12A	Q96EY5	273 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	DERL3	Q96Q80	235 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	S100A13	Q99584	98 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	DUSP23	Q9BVJ7	150 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	LAT2	Q9GZY6	243 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	WDR76	Q9H967	626 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	MMP25	Q9NPA2	562 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	MOK	Q9UQ07	419 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	RCE1	Q9Y256	329 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	NPFFR2	Q9Y5X5	522 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	ZDBF2	Q9HCK1	2354 aa		7.06	□□□□□ -1.28
HNRNPU-223	ENST00000640001	KIAA1671	Q9BY89	1806 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	TRAV18	A0A075B6X5	111 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	LOC100509620	A0A075B734	347 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	HTR3E	A5X5Y0	456 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	PRR19	A6NJB7	356 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	NGFR	P08138	427 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	ZNF20	P17024	532 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	CDKN2A	P42771	156 aa	Known RBP	7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	SLC6A9	P48067	706 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	DCD	P81605	110 aa	Known RBP	7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	FUT7	Q11130	342 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	ALKBH1	Q13686	389 aa	Known RBP	7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	GPR176	Q14439	515 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	TOMM34	Q15785	309 aa	Predicted RBP	7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	FAM69A	Q5T7M9	428 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	C1QL3	Q5VWW1	255 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	NOXA1	Q86UR1	476 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	SIAH3	Q8IW03	269 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	OR5H6	Q8NGV6	325 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	ZNF431	Q8TF32	576 aa	Predicted RBP	7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	PTPMT1	Q8WUK0	201 aa	Predicted RBP	7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	SLC7A6	Q92536	515 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	TAAR8	Q969N4	342 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	ITFG2	Q969R8	447 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	SLC19A3	Q9BZV2	496 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	GAREM1	Q9H706	876 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	B3GAT2	Q9NPZ5	323 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	KLHL9	Q9P2J3	617 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	TMA7	Q9Y2S6	64 aa	Known RBP	7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	MDC1	Q14676	2089 aa	Known RBP	7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	PLXND1	Q9Y4D7	1925 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001		A8MVM7	634 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	SMLR1	H3BR10	107 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	PHYH	O14832	338 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	ALOX12B	O75342	701 aa		7.05	□□□□□ -1.28
HNRNPU-223	ENST00000640001	RBBP9	O75884	186 aa		7.05	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms