RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 NDUFB5O43674 189 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 RAB3BP20337 219 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 KIR2DL3P43628 341 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 MC2RQ01718 297 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 KCNJ8Q15842 424 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 LYPD4Q6UWN0 246 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 BPHLQ86WA6 291 aaPredicted RBP13.68□□□□□ -0.22
TRIM3-215ENST00000639856 LSM14AQ8ND56 463 aaKnown RBP13.68□□□□□ -0.22
TRIM3-215ENST00000639856 OR6F1Q8NGZ6 308 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 TP53INP1Q96A56 240 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 CCDC86Q9H6F5 360 aaKnown RBP13.68□□□□□ -0.22
TRIM3-215ENST00000639856 RPRD1BQ9NQG5 326 aaKnown RBP13.68□□□□□ -0.22
TRIM3-215ENST00000639856 ACOXLQ9NUZ1 547 aa13.68□□□□□ -0.22
TRIM3-215ENST00000639856 PMS2P1A4D2B8 440 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 ATP6V1G1O75348 118 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 TXNDC12O95881 172 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 F13BP05160 661 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 CD59P13987 128 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 TALDO1P37837 337 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 PNLIPRP2P54317 469 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 EMC4Q5J8M3 183 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 IL20RBQ6UXL0 311 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 TRILQ7L0X0 811 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 CPEB2Q7Z5Q1 589 aaKnown RBP13.67□□□□□ -0.22
TRIM3-215ENST00000639856 UBE2J2Q8N2K1 259 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 EXD3Q8N9H8 876 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 ENKURQ8TC29 256 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 ZC3HAV1LQ96H79 300 aaKnown RBP13.67□□□□□ -0.22
TRIM3-215ENST00000639856 KCNJ15Q99712 375 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 MOKQ9UQ07 419 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 NPFFR2Q9Y5X5 522 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 A0A0G2JMP0 313 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 TRBV11-1A0A0K0K1C0 115 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 A0A0X1KG70 313 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 C4orf47A7E2U8 309 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 EIF4E2O60573 245 aaKnown RBP13.67□□□□□ -0.22
TRIM3-215ENST00000639856 GATBO75879 557 aaKnown RBP13.67□□□□□ -0.22
TRIM3-215ENST00000639856 ARL6IP5O75915 188 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 EDNRAP25101 427 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 MAP2K3P46734 347 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 RPS11P62280 158 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRIM3-215ENST00000639856 RPL18Q07020 188 aaKnown RBP13.67□□□□□ -0.22
TRIM3-215ENST00000639856 RSBN1Q5VWQ0 802 aaPredicted RBP13.67□□□□□ -0.22
TRIM3-215ENST00000639856 FAM198BQ6UWH4 519 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 NANOGNBQ7Z5D8 188 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 SAMD12Q8N8I0 201 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 OR4M2Q8NGB6 313 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 MR1Q95460 341 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 TAAR8Q969N4 342 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 TBL1XR1Q9BZK7 514 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 FKRPQ9H9S5 495 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 RBFOX1Q9NWB1 397 aaKnown RBP13.67□□□□□ -0.22
TRIM3-215ENST00000639856 SLC39A1Q9NY26 324 aa13.67□□□□□ -0.22
TRIM3-215ENST00000639856 ZNF318Q5VUA4 2279 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 TMEM200CA6NKL6 621 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 FAM171A2A8MVW0 826 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 SCO2O43819 266 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 CDC40O60508 579 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRIM3-215ENST00000639856 EIF4EP06730 217 aaKnown RBP13.66□□□□□ -0.22
TRIM3-215ENST00000639856 UCHL1P09936 223 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 PRKAR1AP10644 381 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 NPR2P20594 1047 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 ITPKBP27987 946 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 RBMS1P29558 406 aaKnown RBP13.66□□□□□ -0.22
TRIM3-215ENST00000639856 TOMM34Q15785 309 aaPredicted RBP13.66□□□□□ -0.22
TRIM3-215ENST00000639856 SLC25A35Q3KQZ1 300 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 MZT2BQ6NZ67 158 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 TMEM205Q6UW68 189 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 OR4M1Q8NGD0 313 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 TRMT10AQ8TBZ6 339 aaKnown RBP13.66□□□□□ -0.22
TRIM3-215ENST00000639856 TSSK2Q96PF2 358 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 NDEL1Q9GZM8 345 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 RNF121Q9H920 327 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 GRHPRQ9UBQ7 328 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 POU2F3Q9UKI9 436 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 PPIEQ9UNP9 301 aaKnown RBP13.66□□□□□ -0.22
TRIM3-215ENST00000639856 B3GALT1Q9Y5Z6 326 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 GPRIN2O60269 458 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 PAHP00439 452 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 HIST1H2ABP04908 130 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 PGCP20142 388 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 CXCR1P25024 350 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 PSMB10P40306 273 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 ZNF684Q5T5D7 378 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 PLET1Q6UQ28 207 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 HIST3H2AQ7L7L0 130 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 SLC16A9Q7RTY1 509 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 SCAIQ8N9R8 606 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 ZNF511Q8NB15 262 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 DUSP18Q8NEJ0 188 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 RPS4Y2Q8TD47 263 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 HIST1H2ACQ93077 130 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 FRMD6Q96NE9 622 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 PDCD1LG2Q9BQ51 273 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 MFRPQ9BY79 579 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRIM3-215ENST00000639856 ZNF221Q9UK13 617 aa13.66□□□□□ -0.22
TRIM3-215ENST00000639856 A0A1W2PPK0 400 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 NOTOA8MTQ0 251 aa13.65□□□□□ -0.22
TRIM3-215ENST00000639856 LYRM1O43325 122 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms