RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 CXCR1P25024 350 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 PKNOX1P55347 436 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 GLO1Q04760 184 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 EGR3Q06889 387 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 RBBP4Q09028 425 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 CALCOCO2Q13137 446 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 GDPGP1Q6ZNW5 385 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 LRRC8AQ8IWT6 810 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 PIK3C3Q8NEB9 887 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 FAM71CQ8NEG0 241 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 OR5D16Q8NGK9 328 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 ZNF519Q8TB69 540 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 ZNF837Q96EG3 531 aaPredicted RBP9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 OR7D2Q96RA2 312 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 OR51B6Q9H340 312 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 C16orf95Q9H693 158 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 RRAGDQ9NQL2 400 aaPredicted RBP9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 KIF17Q9P2E2 1029 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 RCE1Q9Y256 329 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 SNX24Q9Y343 169 aa9.24□□□□□ -0.93
PTP4A1-207ENST00000639568 TENM2Q9NT68 2774 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 ZNF816-ZNF321PA0A0X1KG74 233 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 DUXAA6NLW8 204 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 M0R3G1 203 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 CRCPO75575 148 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 UROSP10746 265 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 UQCRBP14927 111 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 TAC1P20366 129 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 DBPQ10586 325 aaPredicted RBP9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 C1DQ13901 141 aaKnown RBP9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 HERPUD1Q15011 391 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 TMEM155Q4W5P6 130 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 UNC50Q53HI1 259 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 ZNF678Q5SXM1 525 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 FOXB2Q5VYV0 432 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 ZNF813Q6ZN06 617 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 Q6ZSV7 163 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 C16orf62Q7Z3J2 963 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 OR4S1Q8NGB4 309 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 THOC1Q96FV9 657 aaKnown RBP9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 PRPF18Q99633 342 aaKnown RBP9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 EXOSC3Q9NQT5 275 aaKnown RBP9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 GPATCH2Q9NW75 528 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 TRIM33Q9UPN9 1127 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 PCDHGB5Q9Y5G0 923 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 GPR45Q9Y5Y3 372 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 ARHGAP32A7KAX9 2087 aa9.23□□□□□ -0.93
PTP4A1-207ENST00000639568 NOTCH3Q9UM47 2321 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 K7EIL1 84 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 BCAS1O75363 584 aaPredicted RBP9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 UBL3O95164 117 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 IGHV1-46P01743 117 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 IGHV2-70P01814 119 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 SERPINA5P05154 406 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 GNB2P62879 340 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 RAB39AQ14964 217 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 MAPK14Q16539 360 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 DHRS7BQ6IAN0 325 aaPredicted RBP9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 C6orf89Q6UWU4 347 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 TRIM46Q7Z4K8 759 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 KDM8Q8N371 416 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 POU5F2Q8N7G0 328 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 SPC24Q8NBT2 197 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 CLHC1Q8NHS4 586 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 OIT3Q8WWZ8 545 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 RAB40AQ8WXH6 277 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 MOAP1Q96BY2 351 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 ZNF75AQ96N20 296 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 TSSK3Q96PN8 268 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 CCT7Q99832 543 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 SSBP3Q9BWW4 388 aaPredicted RBP9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 CDH20Q9HBT6 801 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 MID1IP1Q9NPA3 183 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 POFUT2Q9Y2G5 429 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 LRCH1Q9Y2L9 728 aa9.22□□□□□ -0.93
PTP4A1-207ENST00000639568 IGHV2-70DA0A0C4DH43 119 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 GOLGA6L6A8MZA4 724 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 NPIPB8E9PQR5 432 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 AP3D1O14617 1153 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 AKAP8O43823 692 aaKnown RBP9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 IGHV4-59P01825 116 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 UQCRC2P22695 453 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 GTF2E2P29084 291 aaKnown RBP9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 P2RY4P51582 365 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 PCBP3P57721 371 aaKnown RBP9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 ERVS71-1P61550 626 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 ETF1P62495 437 aaKnown RBP9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 RPS26P62854 115 aaKnown RBP9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 KCNJ10P78508 379 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 ARHGAP11BQ3KRB8 267 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 OLIG3Q7RTU3 272 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 LRRC28Q86X40 367 aaPredicted RBP9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 SNX32Q86XE0 403 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 RNF130Q86XS8 419 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 DDIASQ8IXT1 998 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 C11orf44Q8N8P7 122 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 SLC30A7Q8NEW0 376 aa9.21□□□□□ -0.94
PTP4A1-207ENST00000639568 BHLHE22Q8NFJ8 381 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms