RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CCSMST1Q4G0I0 132 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 ZNF595Q8IYB9 648 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 ZNF511Q8NB15 262 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 PFN4Q8NHR9 129 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 LOC100289279A0A1B0GTE1 492 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 D6RAR5 112 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 HOXA9P31269 272 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 TLE4Q04727 773 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 PLPP7Q8NBV4 271 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 UBQLN3Q9H347 655 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 TAAR2Q9P1P5 351 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 SYT14P1Q58G82 188 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 TMEM201Q5SNT2 666 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 AADACL3Q5VUY0 350 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 PAPD4Q6PIY7 484 aaKnown RBP17.1■□□□□ 0.33
SCARB2-213ENST00000638680 LINC00346Q8IVM7 164 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 MMP21Q8N119 569 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 FRMD1Q8N878 549 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 OR10R2Q8NGX6 335 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 KCNG3Q8TAE7 436 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 ZNF566Q969W8 418 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 ELF4Q99607 663 aaPredicted RBP17.1■□□□□ 0.33
SCARB2-213ENST00000638680 LTB4R2Q9NPC1 389 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 PRSS16Q9NQE7 514 aa17.1■□□□□ 0.33
SCARB2-213ENST00000638680 MCTS1Q9ULC4 181 aaKnown RBP17.1■□□□□ 0.33
SCARB2-213ENST00000638680 DRD1P21728 446 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 MSMO1Q15800 293 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 LINC00299Q6ZSB3 139 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 RASD2Q96D21 266 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 HS3ST2Q9Y278 367 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 CBX7O95931 251 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 NAGAP17050 411 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 NUDT1P36639 197 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 NDUFA6P56556 154 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 GLYATL3Q5SZD4 288 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 LILRA3Q8N6C8 439 aaPredicted RBP17.09■□□□□ 0.33
SCARB2-213ENST00000638680 ZBED3Q96IU2 234 aaPredicted RBP17.09■□□□□ 0.33
SCARB2-213ENST00000638680 ARHGAP9Q9BRR9 750 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 PIPP12273 146 aaPredicted RBP17.09■□□□□ 0.33
SCARB2-213ENST00000638680 TEAD1P28347 426 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 CLINT1Q14677 625 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 MDGA2Q7Z553 956 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 MSI2Q96DH6 328 aaKnown RBP17.09■□□□□ 0.33
SCARB2-213ENST00000638680 TOE1Q96GM8 510 aaKnown RBP17.09■□□□□ 0.33
SCARB2-213ENST00000638680 DDOQ99489 341 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 SDHAF2Q9NX18 166 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 ACAD8Q9UKU7 415 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 SRPK3Q9UPE1 567 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 HSPB6O14558 160 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 GPX5O75715 221 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 HTR5AP47898 357 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 PCBD1P61457 104 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 SHEQ5VZ18 495 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 NPSR1Q6W5P4 371 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 FBXO8Q9NRD0 319 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 PURGQ9UJV8 347 aaKnown RBP17.09■□□□□ 0.33
SCARB2-213ENST00000638680 NDRG4Q9ULP0 352 aaKnown RBP17.09■□□□□ 0.33
SCARB2-213ENST00000638680 C9orf135Q5VTT2 229 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 ANKRD34AQ69YU3 496 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 OR4Q3Q8NH05 313 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 FKRPQ9H9S5 495 aa17.09■□□□□ 0.33
SCARB2-213ENST00000638680 RAB19A4D1S5 217 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 AGAP14A8MT82 685 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 EPHA4P54764 986 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 CLDN17P56750 224 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 DEFB103AP81534 67 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 DUSP6Q16828 381 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 SLC22A24Q8N4F4 322 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 SECTM1Q8WVN6 248 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 OR14J1Q9UGF5 321 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 LAMB4A4D0S4 1761 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 LRIT2A6NDA9 550 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 GALR3O60755 368 aaPredicted RBP17.08■□□□□ 0.33
SCARB2-213ENST00000638680 MTHFD2P13995 350 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 SERPINF1P36955 418 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 SLC19A1P41440 591 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 MEP1BQ16820 701 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 PDLIM3Q53GG5 364 aaPredicted RBP17.08■□□□□ 0.33
SCARB2-213ENST00000638680 SOHLH1Q5JUK2 328 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 FAM122BQ7Z309 247 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 CMIPQ8IY22 773 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 OR51S1Q8NGJ8 323 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 ACER3Q9NUN7 267 aa17.08■□□□□ 0.33
SCARB2-213ENST00000638680 SULT1B1O43704 296 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 TIMP1P01033 207 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 ZNF728P0DKX0 622 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 ADGRE4PQ86SQ3 457 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 ARRDC3Q96B67 414 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 OR52A5Q9H2C5 316 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 SLC23A2Q9UGH3 650 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 TRAV36DV7A0A075B6V5 113 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 ZC3H12DA2A288 527 aaKnown RBP17.08■□□□□ 0.32
SCARB2-213ENST00000638680 IGFBP1P08833 259 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-213ENST00000638680 IL2RGP31785 369 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 STK11Q15831 433 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 PXDC1Q5TGL8 231 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 FGGYQ96C11 551 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 HHIPQ96QV1 700 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 GABARAPL1Q9H0R8 117 aa17.08■□□□□ 0.32
SCARB2-213ENST00000638680 GPR55Q9Y2T6 319 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms