RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 RCN3Q96D15 328 aa15.44■□□□□ 0.06
PNKP-230ENST00000638016 BOD1Q96IK1 185 aa15.44■□□□□ 0.06
PNKP-230ENST00000638016 ZNF583Q96ND8 569 aa15.44■□□□□ 0.06
PNKP-230ENST00000638016 SLC38A2Q96QD8 506 aa15.44■□□□□ 0.06
PNKP-230ENST00000638016 ECSITQ9BQ95 431 aa15.44■□□□□ 0.06
PNKP-230ENST00000638016 PRSS27Q9BQR3 290 aa15.44■□□□□ 0.06
PNKP-230ENST00000638016 CCDC134Q9H6E4 229 aa15.44■□□□□ 0.06
PNKP-230ENST00000638016 CBLN4Q9NTU7 201 aa15.44■□□□□ 0.06
PNKP-230ENST00000638016 FAIMQ9NVQ4 179 aa15.44■□□□□ 0.06
PNKP-230ENST00000638016 MRPL39Q9NYK5 338 aaKnown RBP15.44■□□□□ 0.06
PNKP-230ENST00000638016 SH3GLB1Q9Y371 365 aa15.44■□□□□ 0.06
PNKP-230ENST00000638016 CORINQ9Y5Q5 1042 aa15.44■□□□□ 0.06
PNKP-230ENST00000638016 LOC102725191A0A1B0GVB3 256 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 SLC35F4A4IF30 521 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 SSX4O60224 188 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 LY6HO94772 140 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 CECR9P0C854 216 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 AHCYP23526 432 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 PCSK6P29122 969 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 PUDPQ08623 228 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 CAMK2DQ13557 499 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 ZNF74Q16587 644 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 COQ5Q5HYK3 327 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 INTS11Q5TA45 600 aaKnown RBP15.43■□□□□ 0.06
PNKP-230ENST00000638016 ANKRD16Q6P6B7 361 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 DNM1P46Q6ZS02 220 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 SLC30A8Q8IWU4 369 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 SCAIQ8N9R8 606 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 HS6ST2Q96MM7 605 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 ZNF317Q96PQ6 595 aaPredicted RBP15.43■□□□□ 0.06
PNKP-230ENST00000638016 NOX3Q9HBY0 568 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 CAPN7Q9Y6W3 813 aa15.43■□□□□ 0.06
PNKP-230ENST00000638016 ARPC4-TTLL3A0A0A6YYG9 625 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 TRAPPC13A5PLN9 417 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 OR6C65A6NJZ3 312 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 BBIP1A8MTZ0 92 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 RPL36A-HNRNPH2H7BZ11 118 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 ADORA3P0DMS8 318 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 FUT4P22083 530 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 OR1E2P47887 323 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 MELKQ14680 651 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 MFSD13AQ14CX5 517 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 LRRC23Q53EV4 343 aaPredicted RBP15.42■□□□□ 0.06
PNKP-230ENST00000638016 DEF8Q6ZN54 512 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 NKAIN4Q8IVV8 208 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 C20orf196Q8IYI0 205 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 DEPDC4Q8N2C3 294 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 PIK3C3Q8NEB9 887 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 OR5J2Q8NH18 312 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 PFN4Q8NHR9 129 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 GRIP2Q9C0E4 1043 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 PCDHAC1Q9H158 963 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 EVA1AQ9H8M9 152 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 FKRPQ9H9S5 495 aa15.42■□□□□ 0.06
PNKP-230ENST00000638016 MEPEQ9NQ76 525 aaPredicted RBP15.42■□□□□ 0.06
PNKP-230ENST00000638016 JMJD1CQ15652 2540 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 IGHV4-30-2A0A087WSY4 118 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 INAFM1C9JVW0 142 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 IGLV1-44P01699 117 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 IFNGR1P15260 489 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 MDH1P40925 334 aaKnown RBP15.41■□□□□ 0.06
PNKP-230ENST00000638016 IDH3GP51553 393 aaPredicted RBP15.41■□□□□ 0.06
PNKP-230ENST00000638016 UGT2B15P54855 530 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 NAAAQ02083 359 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 MAPRE2Q15555 327 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 MST1LQ2TV78 715 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 ZNF544Q6NX49 715 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 TTC33Q6PID6 262 aaPredicted RBP15.41■□□□□ 0.06
PNKP-230ENST00000638016 VHLLQ6RSH7 139 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 SLC46A3Q7Z3Q1 461 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 MDP1Q86V88 176 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 MAGEE2Q8TD90 523 aaPredicted RBP15.41■□□□□ 0.06
PNKP-230ENST00000638016 FBXO17Q96EF6 278 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 ZNF426Q9BUY5 554 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 REG4Q9BYZ8 158 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 OBP2BQ9NPH6 170 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 CMTM6Q9NX76 183 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 TAS2R5Q9NYW4 299 aa15.41■□□□□ 0.06
PNKP-230ENST00000638016 CRNNQ9UBG3 495 aaPredicted RBP15.41■□□□□ 0.06
PNKP-230ENST00000638016 ZNF99A8MXY4 864 aaPredicted RBP15.4■□□□□ 0.06
PNKP-230ENST00000638016 FAM220BPB1ANY3 271 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 AKAP8O43823 692 aaKnown RBP15.4■□□□□ 0.06
PNKP-230ENST00000638016 MT-ATP6P00846 226 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 HLA-HP01893 362 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 CAPZA2P47755 286 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 SH3BGRP55822 239 aaPredicted RBP15.4■□□□□ 0.06
PNKP-230ENST00000638016 BIDP55957 195 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 LSM11P83369 360 aaKnown RBP eCLIP15.4■□□□□ 0.06
PNKP-230ENST00000638016 NPRL3Q12980 569 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 PIN1Q13526 163 aaPredicted RBP15.4■□□□□ 0.06
PNKP-230ENST00000638016 HSP90B2PQ58FF3 399 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 TREML1Q86YW5 311 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 ZNF525Q8N782 197 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 TMEM255BQ8WV15 326 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 PROX1Q92786 737 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 SH3GL1Q99961 368 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 C20orf141Q9NUB4 165 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 NOX1Q9Y5S8 564 aa15.4■□□□□ 0.06
PNKP-230ENST00000638016 FAM171A2A8MVW0 826 aa15.39■□□□□ 0.05
PNKP-230ENST00000638016 PIP5K1CO60331 668 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms