RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 KTI12Q96EK9 354 aaPredicted RBP15.35■□□□□ 0.05
CLN6-212ENST00000636020 MRI1Q9BV20 369 aa15.35■□□□□ 0.05
CLN6-212ENST00000636020 DENND2DQ9H6A0 471 aaPredicted RBP15.35■□□□□ 0.05
CLN6-212ENST00000636020 ZNF224Q9NZL3 707 aa15.35■□□□□ 0.05
CLN6-212ENST00000636020 EMCNQ9ULC0 261 aa15.35■□□□□ 0.05
CLN6-212ENST00000636020 RNF103-CHMP3A0A140T963 221 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 SLC22A23A1A5C7 686 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 PRAMEF27A3QJZ7 478 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 CFAP73A6NFT4 308 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 HOXA3O43365 443 aaPredicted RBP15.34■□□□□ 0.05
CLN6-212ENST00000636020 TPD52L2O43399 206 aaKnown RBP15.34■□□□□ 0.05
CLN6-212ENST00000636020 NPIPB7O75200 414 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 IGHMP01871 453 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 CRYBA1P05813 215 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 IGHV4-38-2P0DP08 117 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 ZNF250P15622 560 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 GIPRP48546 466 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 KLF3P57682 345 aaPredicted RBP15.34■□□□□ 0.05
CLN6-212ENST00000636020 DNAJB13P59910 316 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 RAB1AP62820 205 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 KPRPQ5T749 579 aaPredicted RBP15.34■□□□□ 0.05
CLN6-212ENST00000636020 C1orf140Q5VVS0 124 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 ZNF627Q7L945 461 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 RIMKLAQ8IXN7 391 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 TMEM123Q8N131 208 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 PIK3C3Q8NEB9 887 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 FAM110DQ8TAY7 271 aaPredicted RBP15.34■□□□□ 0.05
CLN6-212ENST00000636020 SYNPRQ8TBG9 265 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 ELMOD3Q96FG2 381 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 OR2M2Q96R28 347 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 PRPF18Q99633 342 aaKnown RBP15.34■□□□□ 0.05
CLN6-212ENST00000636020 SAP30LQ9HAJ7 183 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 SLCO1C1Q9NYB5 712 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 B3GAT1Q9P2W7 334 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 SEC14L4Q9UDX3 406 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 FIS1Q9Y3D6 152 aa15.34■□□□□ 0.05
CLN6-212ENST00000636020 IGHV3OR16-10A0A075B7F0 116 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 MDFIC2A0A1B0GVS7 189 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 ISPDA4D126 451 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 AGAP5A6NIR3 686 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 FTCDNL1E5RQL4 147 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 C3orf80F5H4A9 247 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 G3V4G9 280 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 LYPLA1O75608 230 aaPredicted RBP15.33■□□□□ 0.04
CLN6-212ENST00000636020 PRB2P02812 416 aaPredicted RBP15.33■□□□□ 0.04
CLN6-212ENST00000636020 VSIG8P0DPA2 414 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 PNMTP11086 282 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 UQCRBP14927 111 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 LSP1P33241 339 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 RAB39AQ14964 217 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 TSTQ16762 297 aaKnown RBP15.33■□□□□ 0.04
CLN6-212ENST00000636020 WHAMMP3Q1A5X7 153 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 ZNF813Q6ZN06 617 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 CLECL1Q8IZS7 167 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 BHLHE22Q8NFJ8 381 aaPredicted RBP15.33■□□□□ 0.04
CLN6-212ENST00000636020 OR52E2Q8NGJ4 325 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 CCL17Q92583 94 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 GTF3AQ92664 365 aaKnown RBP15.33■□□□□ 0.04
CLN6-212ENST00000636020 OXGR1Q96P68 337 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 DUSP26Q9BV47 211 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 PRDM13Q9H4Q3 707 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 GIMAP2Q9UG22 337 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 DNAJC15Q9Y5T4 150 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 DNAH3Q8TD57 4116 aa15.33■□□□□ 0.04
CLN6-212ENST00000636020 M0R3G1 203 aa15.32■□□□□ 0.04
CLN6-212ENST00000636020 RAB36O95755 333 aa15.32■□□□□ 0.04
CLN6-212ENST00000636020 PLATP00750 562 aa15.32■□□□□ 0.04
CLN6-212ENST00000636020 MAKP20794 623 aa15.32■□□□□ 0.04
CLN6-212ENST00000636020 MAPK1P28482 360 aa15.32■□□□□ 0.04
CLN6-212ENST00000636020 GCAP28676 217 aa15.32■□□□□ 0.04
CLN6-212ENST00000636020 SLC7A5Q01650 507 aa15.32■□□□□ 0.04
CLN6-212ENST00000636020 PAX8Q06710 450 aa15.32■□□□□ 0.04
CLN6-212ENST00000636020 TNFAIP8L2Q6P589 184 aaPredicted RBP15.32■□□□□ 0.04
CLN6-212ENST00000636020 FIP1L1Q6UN15 594 aaKnown RBP15.32■□□□□ 0.04
CLN6-212ENST00000636020 ZNF584Q8IVC4 421 aa15.32■□□□□ 0.04
CLN6-212ENST00000636020 PARP8Q8N3A8 854 aa15.32■□□□□ 0.04
CLN6-212ENST00000636020 MFSD8Q8NHS3 518 aa15.32■□□□□ 0.04
CLN6-212ENST00000636020 FBXL3Q9UKT7 428 aa15.32■□□□□ 0.04
CLN6-212ENST00000636020 TENM3Q9P273 2699 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 SRRM5B3KS81 715 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 CLPXO76031 633 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 UBOX5O94941 541 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 SERPINA5P05154 406 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 FAM157BP0CG42 384 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 AQP5P55064 265 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 GPAT3Q53EU6 434 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 VAX1Q5SQQ9 334 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 KANK2Q63ZY3 851 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 ZNF572Q7Z3I7 529 aaPredicted RBP15.31■□□□□ 0.04
CLN6-212ENST00000636020 REC114Q7Z4M0 266 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 C20orf196Q8IYI0 205 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 ZNF519Q8TB69 540 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 ACMSDQ8TDX5 336 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 SLC25A36Q96CQ1 311 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 PRDM4Q9UKN5 801 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 RNF114Q9Y508 228 aa15.31■□□□□ 0.04
CLN6-212ENST00000636020 PEX11AO75192 247 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 AHSA1O95433 338 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 CHEK2O96017 543 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 PRPS1L1P21108 318 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms