RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 LDOC1O95751 146 aaPredicted RBP11.61□□□□□ -0.55
LINC00540-203ENST00000631321 IFNA16P05015 189 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 ADRA2CP18825 462 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 NUDT1P36639 197 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 CAPZBP47756 277 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 MAZP56270 477 aaKnown RBP11.61□□□□□ -0.55
LINC00540-203ENST00000631321 STPG1Q5TH74 334 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 PARGQ86W56 976 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 OR5AK2Q8NH90 309 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 SYNPRQ8TBG9 265 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 C15orf40Q8WUR7 153 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 FCAMRQ8WWV6 532 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 MARVELD3Q96A59 401 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 MIB2Q96AX9 1013 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 ADAD1Q96M93 576 aaKnown RBP11.61□□□□□ -0.55
LINC00540-203ENST00000631321 CITED4Q96RK1 184 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 LPAR4Q99677 370 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 ZNF436Q9C0F3 470 aaPredicted RBP11.61□□□□□ -0.55
LINC00540-203ENST00000631321 SLITRK2Q9H156 845 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 WSB2Q9NYS7 404 aaPredicted RBP11.61□□□□□ -0.55
LINC00540-203ENST00000631321 CD207Q9UJ71 328 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 ZNF346Q9UL40 294 aaKnown RBP11.61□□□□□ -0.55
LINC00540-203ENST00000631321 PLCL2Q9UPR0 1127 aa11.61□□□□□ -0.55
LINC00540-203ENST00000631321 TMEM184BQ9Y519 407 aaPredicted RBP11.61□□□□□ -0.55
LINC00540-203ENST00000631321 CHURC1-FNTBB4DL54 471 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 G3V3Q6 166 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 ZNF432O94892 652 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 DNASE1P24855 282 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 PPICP45877 212 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 FASLGP48023 281 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 FNTBP49356 437 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 P2RX1P51575 399 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 SLC37A1P57057 533 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 SCAND1P57086 179 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 RIPPLY1Q0D2K3 151 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 CCINQ13939 588 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 LGALSLQ3ZCW2 172 aaPredicted RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 METTL11BQ5VVY1 283 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 SFRP4Q6FHJ7 346 aaPredicted RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 CBLN3Q6UW01 205 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 APOOLQ6UXV4 268 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 DND1Q8IYX4 353 aaKnown RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 OR6V1Q8N148 313 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 C10orf53Q8N6V4 93 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 GATSQ8NAP1 163 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 CCDC74AQ96AQ1 378 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 MMABQ96EY8 250 aaPredicted RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 TOE1Q96GM8 510 aaKnown RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 MED30Q96HR3 178 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 GPR174Q9BXC1 333 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 ADAM19Q9H013 955 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 TCF7L1Q9HCS4 588 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 NPDC1Q9NQX5 325 aaPredicted RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 MRPL15Q9P015 296 aaKnown RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 FLVCR2Q9UPI3 526 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 RANBP2P49792 3224 aaKnown RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 FITM1A5D6W6 292 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 OR4C45A6NMZ5 311 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 HSPB2A8KAH6 182 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 C17orf105B2RV13 164 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 H0YIG0 161 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 DCTN6O00399 190 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 ZNF264O43296 627 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 SERPINI2O75830 405 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 UTS2O95399 124 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 CSRP1P21291 193 aaKnown RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 MECP2P51608 486 aaKnown RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 ART1P52961 327 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 CLDN12P56749 244 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 RPL18Q07020 188 aaKnown RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 HSPB2Q16082 182 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 MESTQ5EB52 335 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 TMEM69Q5SWH9 247 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 GPR139Q6DWJ6 353 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 LRRN1Q6UXK5 716 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 NLRC3Q7RTR2 1065 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 OR2T4Q8NH00 348 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 PHOSPHO1Q8TCT1 267 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 PTPMT1Q8WUK0 201 aaPredicted RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 GCDHQ92947 438 aaPredicted RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 ZNF524Q96C55 264 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 NXPE2Q96DL1 559 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 TSPAN32Q96QS1 320 aa11.6□□□□□ -0.55
LINC00540-203ENST00000631321 SPRTNQ9H040 489 aaPredicted RBP11.6□□□□□ -0.55
LINC00540-203ENST00000631321 DNAH14Q0VDD8 3507 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 XIRP2A4UGR9 3374 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 LILRA5A6NI73 299 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 SHISA7A6NL88 538 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 ACOT7O00154 380 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 SCDO00767 359 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 ZNF254O75437 659 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 RPP14O95059 124 aaKnown RBP11.59□□□□□ -0.55
LINC00540-203ENST00000631321 PROS1P07225 676 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 HPGDP15428 266 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 CDK2P24941 298 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 CFPP27918 469 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 SELENOPP49908 381 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 EGR3Q06889 387 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 EEF1A1P5Q5VTE0 462 aa11.59□□□□□ -0.55
LINC00540-203ENST00000631321 Q6ZTK2 550 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms