RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 H7C1Q1 480 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 J3KTA2 159 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 CASKO14936 926 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 IFNA14P01570 189 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 GABRA1P14867 456 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 SERPINB1P30740 379 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 LIPAP38571 399 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 OR1E2P47887 323 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 CASP9P55211 416 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 CDH12P55289 794 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 DSTNP60981 165 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 IFITM3Q01628 133 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 TGM3Q08188 693 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 DUSP8Q13202 625 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 DGUOKQ16854 277 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 DEFB113Q30KQ7 82 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 C1QTNF12Q5T7M4 302 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 DEPDC1Q5TB30 811 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 KHDRBS2Q5VWX1 349 aaKnown RBP4.35□□□□□ -1.71
LINC00550-201ENST00000629293 CXXC5Q7LFL8 322 aaKnown RBP4.35□□□□□ -1.71
LINC00550-201ENST00000629293 SLC46A3Q7Z3Q1 461 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 NATD1Q8N6N6 113 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 OR9Q2Q8NGE9 314 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 OR5AK3PQ8NH89 298 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 OR14A16Q8NHC5 309 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 PSMA8Q8TAA3 256 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 SLC22A8Q8TCC7 542 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 OR5P2Q8WZ92 322 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 GGHQ92820 318 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 RPL3LQ92901 407 aaKnown RBP4.35□□□□□ -1.71
LINC00550-201ENST00000629293 TM4SF18Q96CE8 201 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 ZC3HAV1LQ96H79 300 aaKnown RBP4.35□□□□□ -1.71
LINC00550-201ENST00000629293 FUZQ9BT04 418 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 NXF2Q9GZY0 626 aaKnown RBP4.35□□□□□ -1.71
LINC00550-201ENST00000629293 ZFP64Q9NPA5 681 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 DLL4Q9NR61 685 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 B4GALT7Q9UBV7 327 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 DSCAMO60469 2012 aa4.35□□□□□ -1.71
LINC00550-201ENST00000629293 ZAR1LA6NP61 321 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 FFAR1O14842 300 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 FGF17O60258 216 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 CTNSO60931 367 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 RAF1P04049 648 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 OCM2P0CE71 109 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 OCMP0CE72 109 aaPredicted RBP4.34□□□□□ -1.71
LINC00550-201ENST00000629293 ADORA3P0DMS8 318 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 CD36P16671 472 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 CHI3L1P36222 383 aaPredicted RBP4.34□□□□□ -1.71
LINC00550-201ENST00000629293 SLC15A1P46059 708 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 GSTM5P46439 218 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 KCNJ5P48544 419 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 BCAP31P51572 246 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 DGCR6Q14129 220 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 KRTAP21-3Q3LHN1 58 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 TMEM236Q5W0B7 351 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 REEP3Q6NUK4 255 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 SLC29A4Q7RTT9 530 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 YRDCQ86U90 279 aaKnown RBP4.34□□□□□ -1.71
LINC00550-201ENST00000629293 TMCO5AQ8N6Q1 288 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 ACOT4Q8N9L9 421 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 MINDY2Q8NBR6 621 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 ACBD4Q8NC06 268 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 GPR32P1Q8NGA4 272 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 HTRA1Q92743 480 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 PROX1Q92786 737 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 MYDGFQ969H8 173 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 INTS12Q96CB8 462 aaKnown RBP4.34□□□□□ -1.71
LINC00550-201ENST00000629293 LGALS12Q96DT0 336 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 PERPQ96FX8 193 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 TREX2Q9BQ50 279 aaPredicted RBP4.34□□□□□ -1.71
LINC00550-201ENST00000629293 CHCHD6Q9BRQ6 235 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 TEX10Q9NXF1 929 aaPredicted RBP4.34□□□□□ -1.71
LINC00550-201ENST00000629293 GIN1Q9NXP7 522 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 SELENONQ9NZV5 590 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 A3GALT2U3KPV4 340 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 HEATR5AQ86XA9 2040 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 METTL15A6NJ78 407 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 HSPB2A8KAH6 182 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 M0R3G1 203 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 CYR61O00622 381 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 ADRA2AP08913 450 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 H2AFB1P0C5Y9 115 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 H2AFB2P0C5Z0 115 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 C21orf33P30042 268 aaPredicted RBP4.34□□□□□ -1.71
LINC00550-201ENST00000629293 GDNFP39905 211 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 SERPINB10P48595 397 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 ASCL1P50553 236 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 PSMD7P51665 324 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 FBXW4P57775 412 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 HSPB2Q16082 182 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 DUSP7Q16829 419 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 EIPR1Q53HC9 387 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 C18orf63Q68DL7 685 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 KLHL17Q6TDP4 642 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 ANGPTL8Q6UXH0 198 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 PAMR1Q6UXH9 720 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 ETV3LQ6ZN32 361 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 BIVMQ86UB2 503 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 C9orf40Q8IXQ3 194 aa4.34□□□□□ -1.71
LINC00550-201ENST00000629293 TTLQ8NG68 377 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms