RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 APOC4-APOC2K7ER74 178 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 DNASE2O00115 360 aaPredicted RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 UBFD1O14562 309 aaKnown RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 HNRNPDLO14979 420 aaKnown RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 APOC2P02655 101 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 HOXB5P09067 269 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 ALDOCP09972 364 aaKnown RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF705DP0CH99 300 aaPredicted RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF705BP0CI00 300 aaPredicted RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF865P0CJ78 1059 aaPredicted RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF44P15621 663 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 TBPP20226 339 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 USF1P22415 310 aaPredicted RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 PRKACGP22612 351 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 RAB8AP61006 207 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 ARG2P78540 354 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 GTF2BQ00403 316 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 CDC42EP1Q00587 391 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 SMAGPQ0VAQ4 97 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 IL10RAQ13651 578 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 SF3A2Q15428 464 aaKnown RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 KHDC1LQ5JSQ8 128 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 NXNL2Q5VZ03 156 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF621Q6ZSS3 439 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF367Q7RTV3 350 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 SPPL2CQ8IUH8 684 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 OR1L6Q8NGR2 347 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 OR1L4Q8NGR5 311 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 WDR20Q8TBZ3 569 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 POP5Q969H6 163 aaKnown RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 CMTM7Q96FZ5 175 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 ALKBH3Q96Q83 286 aaPredicted RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 MYOCQ99972 504 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 CNTNAP3Q9BZ76 1288 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 RNF121Q9H920 327 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 MMP25Q9NPA2 562 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 RASL12Q9NYN1 266 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 MARCH4Q9P2E8 410 aaPredicted RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 USP22Q9UPT9 525 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 CDH10Q9Y6N8 788 aa3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 TP53BP1Q12888 1972 aaPredicted RBP3.59□□□□□ -1.84
R3HDM1-220ENST00000628915 A0A1W2PRU2 124 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 SHISA8B8ZZ34 492 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 D6RAR5 112 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 SRPX2O60687 465 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 OR4F21O95013 312 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 TSPAN15O95858 294 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 JCHAINP01591 159 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 FABP3P05413 133 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 SCGB1A1P11684 91 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 MTHFD2P13995 350 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 IL7RP16871 459 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 DUSP1P28562 367 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 CTSKP43235 329 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 CYB561P49447 251 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 ATP4BP51164 291 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 EFNA3P52797 238 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 TLE1Q04724 770 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 TLE3Q04726 772 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 ELAVL2Q12926 359 aaKnown RBP3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 ISXQ2M1V0 245 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 OTUD3Q5T2D3 398 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 C1orf189Q5VU69 101 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 PODNL1Q6PEZ8 512 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 MON1BQ7L1V2 547 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 LYG2Q86SG7 212 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 RNF130Q86XS8 419 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 PHF13Q86YI8 300 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF547Q8IVP9 402 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 CMTM8Q8IZV2 173 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 CCDC71LQ8N9Z2 235 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 INO80EQ8NBZ0 244 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 OR51S1Q8NGJ8 323 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 OR52E5Q8NH55 327 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 OR2V1Q8NHB1 315 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 RPLP0P6Q8NHW5 317 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 CNOT9Q92600 299 aaKnown RBP3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 HAS1Q92839 578 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 MCHR2Q969V1 340 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 ISL2Q96A47 359 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF419Q96HQ0 510 aaPredicted RBP3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM56Q96MV1 263 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 PBDC1Q9BVG4 233 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 BOCQ9BWV1 1114 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 PECRQ9BY49 303 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 EGLN1Q9GZT9 426 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 FBXL17Q9UF56 701 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM56-RWDD3S4R434 201 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM265A0A087WTH1 108 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 TCRBV7S3A2A0A539 114 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 ANXA2P2A6NMY6 339 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 K7EPK0 472 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 RAB27BO00194 218 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 FAAHO00519 579 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 CDIPTO14735 213 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 EREGO14944 169 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF207O43670 478 aaKnown RBP3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF623O75123 536 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 CILPO75339 1184 aa3.58□□□□□ -1.84
R3HDM1-220ENST00000628915 ALOX12BO75342 701 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms