RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	GPR52	Q9Y2T5	361 aa		5.19	□□□□□ -1.58
LINC00963-215	ENST00000622972	CSMD2	Q7Z408	3487 aa		5.19	□□□□□ -1.58
LINC00963-215	ENST00000622972	RAI1	Q7Z5J4	1906 aa	Predicted RBP	5.19	□□□□□ -1.58
LINC00963-215	ENST00000622972	CELSR1	Q9NYQ6	3014 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	AKAP9	Q99996	3911 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972		A0A087WUJ7	227 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	TRBV4-1	A0A0J9YWV2	114 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	TRIM64	A6NGJ6	449 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	TRIM64B	A6NI03	449 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	LIPT2	A6NK58	231 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	ZNF716	A6NP11	495 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972		H3BNX3	289 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	HS3ST1	O14792	307 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	GYG2	O15488	501 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	KLF4	O43474	513 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	CHP2	O43745	196 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	FMO6P	O60774	539 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	SERPINB7	O75635	380 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	CNOT4	O95628	575 aa	Known RBP	5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	PLAU	P00749	431 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	ADA	P00813	363 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	CD3E	P07766	207 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	TFPI	P10646	304 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	DIO1	P49895	249 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	POLR2H	P52434	150 aa	Known RBP	5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	FXYD6P3	P58550	94 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	RPS4X	P62701	263 aa	Known RBP	5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	H3F3A	P84243	136 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	IFI44L	Q53G44	452 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	INTS11	Q5TA45	600 aa	Known RBP	5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	C3orf33	Q6P1S2	294 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	TBPL2	Q6SJ96	375 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	PRSS57	Q6UWY2	283 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	NUFIP2	Q7Z417	695 aa	Known RBP	5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	KRTAP1-3	Q8IUG1	177 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	CCDC103	Q8IW40	242 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	ZNF100	Q8IYN0	542 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	OFCC1	Q8IZS5	231 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	UBE2J2	Q8N2K1	259 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	CIART	Q8N365	385 aa	Predicted RBP	5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	SLC43A2	Q8N370	569 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	LRRC17	Q8N6Y2	441 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	PIK3C3	Q8NEB9	887 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	OR4C15	Q8NGM1	316 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	ZNF563	Q8TA94	476 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	RNF128	Q8TEB7	428 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	AKAP1	Q92667	903 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	KISS1R	Q969F8	398 aa	Predicted RBP	5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	S100PBP	Q96BU1	408 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	SLC41A3	Q96GZ6	507 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	PRRC1	Q96M27	445 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	OR5B2	Q96R09	309 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	ZNF300	Q96RE9	604 aa	Predicted RBP	5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	SPATA5L1	Q9BVQ7	753 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	HDHD5	Q9BXW7	423 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	ESRP2	Q9H6T0	727 aa	Known RBP	5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	SERINC1	Q9NRX5	453 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	KLHL9	Q9P2J3	617 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	KLHL13	Q9P2N7	655 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	RIMS3	Q9UJD0	308 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	SLC7A7	Q9UM01	511 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	AP3M1	Q9Y2T2	418 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	RNF115	Q9Y4L5	304 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	ENPP4	Q9Y6X5	453 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	ITPR3	Q14573	2671 aa		5.18	□□□□□ -1.58
LINC00963-215	ENST00000622972	CSMD1	Q96PZ7	3565 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972		A0A087WUU8	490 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	SCO2	A0A1W2PP80	73 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	CIB4	A0PJX0	185 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	TRAPPC13	A5PLN9	417 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	TMEM247	A6NEH6	219 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	KPNA4	O00629	521 aa	Predicted RBP	5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	CDC42EP2	O14613	210 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	RGS13	O14921	159 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	GSTA4	O15217	222 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	ZNF208	O43345	1280 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	LYZL6	O75951	148 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	OR5F1	O95221	314 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	TP53	P04637	393 aa	Predicted RBP	5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	THBD	P07204	575 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	YES1	P07947	543 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	TSPAN19	P0C672	248 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	HLA-DOB	P13765	273 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	ATF4	P18848	351 aa	Predicted RBP	5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	PSMB1	P20618	241 aa	Known RBP	5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	MAK	P20794	623 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	CBL	P22681	906 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	APOBEC1	P41238	236 aa	Known RBP	5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	RPS5	P46782	204 aa	Known RBP	5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	MNAT1	P51948	309 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	FOXG1	P55316	489 aa	Predicted RBP	5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	GABPB1	Q06547	395 aa	Predicted RBP	5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	LGALS3BP	Q08380	585 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	RASGEF1B	Q0VAM2	473 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	FAP	Q12884	760 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	SPATS1	Q496A3	300 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	DNAL1	Q4LDG9	190 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	ALG10B	Q5I7T1	473 aa		5.17	□□□□□ -1.58
LINC00963-215	ENST00000622972	C1orf140	Q5VVS0	124 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms