RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 AGPAT1Q99943 283 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 SLC30A2Q9BRI3 323 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 NAT9Q9BTE0 207 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 TSSK1BQ9BXA7 367 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 ADAP2Q9NPF8 381 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 TECRQ9NZ01 308 aaKnown RBP2.96□□□□□ -1.94
BRCA1-229ENST00000621897 IFNKQ9P0W0 207 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 PSMC3IPQ9P2W1 217 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-229ENST00000621897 IKZF2Q9UKS7 526 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 TIMM22Q9Y584 194 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 LRPPRCP42704 1394 aaKnown RBP2.96□□□□□ -1.94
BRCA1-229ENST00000621897 MAP3K5Q99683 1374 aa2.96□□□□□ -1.94
BRCA1-229ENST00000621897 KCNE1BA0A087WTH5 132 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 A0A1W2PNV4 684 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 TMEM213A2RRL7 107 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 ZNF99A8MXY4 864 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 RNASEK-C17orf49H0YIS7 233 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 DLGAP1O14490 977 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 OR10H3O60404 316 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 LYPD3O95274 346 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 FADS2O95864 444 aaKnown RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 CST4P01036 141 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 GSTA2P09210 222 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 SLC35E2P0CK97 266 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 HSMCR30P0CW71 290 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 UQCRBP14927 111 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 HMOX2P30519 316 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 HNRNPH3P31942 346 aaKnown RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 CDKN2CP42773 168 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 GYG1P46976 350 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 UQCRFS1P47985 274 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 TGM4P49221 684 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 PLA2G16P53816 162 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 MFAP2P55001 183 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 ERVPABLB-1P60509 514 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 HERVK_113P63132 956 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 ERVK-8P63133 956 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 ADARB1P78563 741 aaKnown RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 OGDHQ02218 1023 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 STX5Q13190 355 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 GK3PQ14409 553 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 EXOSC7Q15024 291 aaKnown RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 KIAA0040Q15053 153 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 OR1C1Q15619 314 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 MOGQ16653 247 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 CDKN3Q16667 212 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 ISXQ2M1V0 245 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 GOLGA7BQ2TAP0 167 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 GLYR1Q49A26 553 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 SLC8B1Q6J4K2 584 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 ZNF530Q6P9A1 599 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 TTC33Q6PID6 262 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 FAM151BQ6UXP7 276 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 FAM122BQ7Z309 247 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 DPY19L4Q7Z388 723 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 SERPINA9Q86WD7 417 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 MMAAQ8IVH4 418 aaKnown RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 LIX1Q8N485 282 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 MLKLQ8NB16 471 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 CYB561A3Q8NBI2 242 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 ZNF680Q8NEM1 530 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 NFAM1Q8NET5 270 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 OR6M1Q8NGM8 313 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 OR4L1Q8NH43 312 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 LINC01006Q8NI28 216 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 TMEM37Q8WXS4 190 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 ESR2Q92731 530 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 NAT6Q93015 286 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 TMA16Q96EY4 203 aaKnown RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 VSIG2Q96IQ7 327 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 OPALINQ96PE5 141 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 DEFB118Q96PH6 123 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 TSSK3Q96PN8 268 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 S1PR3Q99500 378 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 RIT2Q99578 217 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 P2RY13Q9BPV8 354 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 MED10Q9BTT4 135 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 FUNDC2Q9BWH2 189 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 ERVK-6Q9BXR3 956 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 PARD6GQ9BYG4 376 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 DRC3Q9H069 523 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 KAT8Q9H7Z6 458 aaKnown RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 ADGRL4Q9HBW9 690 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 POLD4Q9HCU8 107 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 CD209Q9NNX6 404 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 PTTG3PQ9NZH4 202 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 SLC17A7Q9P2U7 560 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 MIOXQ9UGB7 285 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 CLEC2DQ9UHP7 191 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 PLLPQ9Y342 182 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 SAMHD1Q9Y3Z3 626 aaKnown RBP2.95□□□□□ -1.94
BRCA1-229ENST00000621897 AK9Q5TCS8 1911 aa2.95□□□□□ -1.94
BRCA1-229ENST00000621897 GRIN2DO15399 1336 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 AFF2P51816 1311 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 MAP3K15Q6ZN16 1313 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 KBTBD11-OT1A0A1B0GTJ5 212 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 SMCO2A6NFE2 343 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 GOLGA8JA6NMD2 632 aa2.94□□□□□ -1.94
BRCA1-229ENST00000621897 GOLGA8KD6RF30 607 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms