RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 CHRNA9Q9UGM1 479 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 ENPP5Q9UJA9 477 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 SVEP1Q4LDE5 3571 aa9.5□□□□□ -0.89
VPS11-208ENST00000621676 A0A075B6Q4 140 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 A0A1W2PR80 420 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 PRR32B1ATL7 298 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 TFECO14948 347 aaPredicted RBP9.49□□□□□ -0.89
VPS11-208ENST00000621676 OR7A10O76100 309 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 HMGN1P05114 100 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 FGF5P12034 268 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 RBMS1P29558 406 aaKnown RBP9.49□□□□□ -0.89
VPS11-208ENST00000621676 C17orf67Q0P5P2 114 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 NIPAL3Q6P499 406 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 NPRL2Q8WTW4 380 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 TSPAN32Q96QS1 320 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 RBM24Q9BX46 236 aaKnown RBP9.49□□□□□ -0.89
VPS11-208ENST00000621676 CCNB1IP1Q9NPC3 277 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 PTTG2Q9NZH5 202 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 DAPK2Q9UIK4 370 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 SLC22A13Q9Y226 551 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 AK6Q9Y3D8 172 aaKnown RBP9.49□□□□□ -0.89
VPS11-208ENST00000621676 PMF1-BGLAPU3KQ54 211 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 P04436 131 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 SPI1P17947 270 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 DCKP27707 260 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 IDUAP35475 653 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 TGFBR2P37173 567 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 PNLIPRP2P54317 469 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 ADAM8P78325 824 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 ABHD17BQ5VST6 288 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 AADACL4Q5VUY2 407 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 FAM26EQ8N5C1 309 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 OR1J4Q8NGS1 313 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 SLC22A8Q8TCC7 542 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 DHRS1Q96LJ7 313 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 CDADC1Q9BWV3 514 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 C1QTNF6Q9BXI9 259 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 DEPPQ9NTK1 212 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 ENOPH1Q9UHY7 261 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 SHISA3A0PJX4 238 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 NPIPA5E9PKD4 350 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 FADS1O60427 444 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 IFNGP01579 166 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 CAPZA2P47755 286 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 HSF1Q00613 529 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.49□□□□□ -0.89
VPS11-208ENST00000621676 MESTQ5EB52 335 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 CEACAM19Q7Z692 300 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 OR51A4Q8NGJ6 313 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 ZNF837Q96EG3 531 aaPredicted RBP9.49□□□□□ -0.89
VPS11-208ENST00000621676 KCNK15Q9H427 330 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 TAS2R5Q9NYW4 299 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 MRPL15Q9P015 296 aaKnown RBP9.49□□□□□ -0.89
VPS11-208ENST00000621676 NPIPA1Q9UND3 350 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 SSR3Q9UNL2 185 aa9.49□□□□□ -0.89
VPS11-208ENST00000621676 TRBV2A0A0J9YWF9 115 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 MAS1P04201 325 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 SBK2P0C263 348 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 PNMTP11086 282 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 RPS6KA3P51812 740 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 WNT4P56705 351 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 NIPAL1Q6NVV3 410 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 FAM83FQ8NEG4 500 aaPredicted RBP9.48□□□□□ -0.89
VPS11-208ENST00000621676 GHSRQ92847 366 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 RFKQ969G6 155 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 NKD1Q969G9 470 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 SFXN2Q96NB2 322 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 OR14A2Q96R54 314 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 TAAR9Q96RI9 348 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 C14orf105Q9NVL8 296 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 NDUFA13Q9P0J0 144 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 FBXL3Q9UKT7 428 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 WIF1Q9Y5W5 379 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 GMEB1Q9Y692 573 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 ZNF593O00488 134 aaPredicted RBP9.48□□□□□ -0.89
VPS11-208ENST00000621676 CXCL13O43927 109 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 PTP4A3O75365 173 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 ACP1P24666 158 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 CD96P40200 585 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 CLDN17P56750 224 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 SYT6Q5T7P8 510 aaPredicted RBP9.48□□□□□ -0.89
VPS11-208ENST00000621676 LAX1Q8IWV1 398 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 GCNT2Q8N0V5 402 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 POMGNT2Q8NAT1 580 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 OR5M9Q8NGP3 310 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 TBC1D15Q8TC07 691 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 MND1Q9BWT6 205 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 PTGES2Q9H7Z7 377 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 SLC25A19Q9HC21 320 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 ZNF71Q9NQZ8 489 aaPredicted RBP9.48□□□□□ -0.89
VPS11-208ENST00000621676 CMC2Q9NRP2 79 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 LAMP5Q9UJQ1 280 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 TNFRSF10AO00220 468 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 KLK10O43240 276 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 PLATP00750 562 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 CYB561P49447 251 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 TMPRSS11FQ6ZWK6 438 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 MRGPREQ86SM8 312 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 KLHL36Q8N4N3 616 aa9.48□□□□□ -0.89
VPS11-208ENST00000621676 NPEPL1Q8NDH3 523 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms