RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 UPK3AO75631 287 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 SERPINI2O75830 405 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 SAGP10523 405 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-217ENST00000621474 IFNGR1P15260 489 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 FXYD6P3P58550 94 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 IL1RL1Q01638 556 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 ITGADQ13349 1161 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 C1DQ13901 141 aaKnown RBP12.62□□□□□ -0.39
CBWD3-217ENST00000621474 CCNIQ14094 377 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 OR2T5Q6IEZ7 315 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 ZNF770Q6IQ21 691 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-217ENST00000621474 KIF18BQ86Y91 864 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 OR2T29Q8NH02 315 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 WFIKKN1Q96NZ8 548 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 ALKBH3Q96Q83 286 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-217ENST00000621474 SLCO5A1Q9H2Y9 848 aa12.62□□□□□ -0.39
CBWD3-217ENST00000621474 CCM2LQ9NUG4 571 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-217ENST00000621474 HRNRQ86YZ3 2850 aaPredicted RBP12.61□□□□□ -0.39
CBWD3-217ENST00000621474 SLC35F4A4IF30 521 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 TUBAL3A6NHL2 446 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 EFCAB9A8MZ26 197 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 LYZL6O75951 148 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 KRT36O76013 467 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 HIST1H2ABP04908 130 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 PRF1P14222 555 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 COX6B1P14854 86 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 IST1P53990 364 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 SMIM11AP58511 58 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 FAPQ12884 760 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 MELKQ14680 651 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 P2RY6Q15077 328 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 PHYHD1Q5SRE7 291 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 C1orf146Q5VVC0 180 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 ANKRD34AQ69YU3 496 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 SLC35D2Q76EJ3 337 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 HIST3H2AQ7L7L0 130 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 YTHDF3Q7Z739 585 aaKnown RBP12.61□□□□□ -0.39
CBWD3-217ENST00000621474 ZNF433Q8N7K0 673 aaPredicted RBP12.61□□□□□ -0.39
CBWD3-217ENST00000621474 ANKK1Q8NFD2 765 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 OR9Q2Q8NGE9 314 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 OR51A7Q8NH64 312 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 HIST1H2ACQ93077 130 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 TNFRSF13CQ96RJ3 184 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 MCCC2Q9HCC0 563 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 ASB6Q9NWX5 421 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 SIGLEC7Q9Y286 467 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 U3KQV3 271 aa12.61□□□□□ -0.39
CBWD3-217ENST00000621474 TNFRSF11BO00300 401 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 FKBP6O75344 327 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 PTP4A3O75365 173 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 OR6A2O95222 327 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 THBDP07204 575 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 DNAJA1P31689 397 aaKnown RBP12.6□□□□□ -0.39
CBWD3-217ENST00000621474 PEX19P40855 299 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 KIR2DL3P43628 341 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 SLC9A3P48764 834 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 RUNX1T1Q06455 604 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 C1orf94Q6P1W5 598 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 PGBD2Q6P3X8 592 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 RRM2BQ7LG56 351 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 TMEM179BQ7Z7N9 219 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 OAFQ86UD1 273 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 UBE2J2Q8N2K1 259 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 POMGNT2Q8NAT1 580 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 MARVELD3Q96A59 401 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 S100PBPQ96BU1 408 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 ZNF837Q96EG3 531 aaPredicted RBP12.6□□□□□ -0.39
CBWD3-217ENST00000621474 LINC00470Q9BZP3 86 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 ACTR6Q9GZN1 396 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 TAS2R16Q9NYV7 291 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 TMEM5Q9Y2B1 443 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 GPR52Q9Y2T5 361 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 ABCA12Q86UK0 2595 aa12.6□□□□□ -0.39
CBWD3-217ENST00000621474 SH3D21A4FU49 640 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 MCIDASD6RGH6 385 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 CLOCKO15516 846 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 SIAH2O43255 324 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 HNRNPRO43390 633 aaKnown RBP12.59□□□□□ -0.39
CBWD3-217ENST00000621474 OR10H3O60404 316 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 CST1P01037 141 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 BIDP55957 195 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 CAMK2DQ13557 499 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 ACKR1Q16570 336 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 ZBED5Q49AG3 693 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 ALG10Q5BKT4 473 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 ARMC4Q5T2S8 1044 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 SEZ6L2Q6UXD5 910 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 IGFN1Q86VF2 1251 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 OR6X1Q8NH79 312 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 KISS1RQ969F8 398 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-217ENST00000621474 DUS3LQ96G46 650 aaKnown RBP12.59□□□□□ -0.39
CBWD3-217ENST00000621474 DACH2Q96NX9 599 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 OR10A4Q9H209 315 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 INIPQ9NRY2 104 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 KCNN3Q9UGI6 736 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 SAMHD1Q9Y3Z3 626 aaKnown RBP12.59□□□□□ -0.39
CBWD3-217ENST00000621474 ITPR2Q14571 2701 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 CADP27708 2225 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 NPIPB13A6NJU9 1138 aa12.59□□□□□ -0.39
CBWD3-217ENST00000621474 NPIPB4C9JG80 1138 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms