RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 MAMSTRQ6ZN01 415 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 ZNF454Q8N9F8 522 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 SPPL3Q8TCT6 385 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 SCARF2Q96GP6 870 aaPredicted RBP17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 RNF208Q9H0X6 261 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 FRRS1LQ9P0K9 344 aa17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 MRM2Q9UI43 246 aaKnown RBP17.86■□□□□ 0.45
PDLIM3-212ENST00000620787 CHD7Q9P2D1 2997 aa17.85■□□□□ 0.45
PDLIM3-212ENST00000620787 A0A1W2PQU0 124 aa17.85■□□□□ 0.45
PDLIM3-212ENST00000620787 RLN1P04808 185 aa17.85■□□□□ 0.45
PDLIM3-212ENST00000620787 C5AR1P21730 350 aa17.85■□□□□ 0.45
PDLIM3-212ENST00000620787 MAPK3P27361 379 aaPredicted RBP17.85■□□□□ 0.45
PDLIM3-212ENST00000620787 CTNNB1P35222 781 aa17.85■□□□□ 0.45
PDLIM3-212ENST00000620787 RPS21P63220 83 aaKnown RBP17.85■□□□□ 0.45
PDLIM3-212ENST00000620787 PSG6Q00889 435 aa17.85■□□□□ 0.45
PDLIM3-212ENST00000620787 ISXQ2M1V0 245 aa17.85■□□□□ 0.45
PDLIM3-212ENST00000620787 FIGLAQ6QHK4 219 aa17.85■□□□□ 0.45
PDLIM3-212ENST00000620787 LRRN1Q6UXK5 716 aa17.85■□□□□ 0.45
PDLIM3-212ENST00000620787 CAMKVQ8NCB2 501 aa17.85■□□□□ 0.45
PDLIM3-212ENST00000620787 TRAV8-7A0A075B6U6 113 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 TMEM72A0PK05 275 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 D6RAR5 112 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 IFI6P09912 130 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 GPR143P51810 404 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 RPS4XP62701 263 aaKnown RBP17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 LEG1Q6P5S2 330 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 PSRC1Q6PGN9 363 aaPredicted RBP17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 OR6N1Q8NGY5 312 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 SLC22A18Q96BI1 424 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 MRPS24Q96EL2 167 aaKnown RBP17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 CAPNS2Q96L46 248 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 ASB16Q96NS5 453 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 SLC17A9Q9BYT1 436 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 ZNF337Q9Y3M9 751 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 TRBV23OR9-2A0A075B6M9 112 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 A0A087WUJ7 227 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 ABHD16AO95870 558 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 ADH1BP00325 375 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 HPP00738 406 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 EGFP01133 1207 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 IGF2P01344 180 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 MPGP29372 298 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 CDKN2AP42771 156 aaKnown RBP17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 KIR2DS3Q14952 304 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 LIPNQ5VXI9 398 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 ZNF550Q7Z398 422 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 CCDC74AQ96AQ1 378 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 ANKRD9Q96BM1 317 aaPredicted RBP17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 OR2M4Q96R27 311 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 LMAN2LQ9H0V9 348 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 SPACA6W5XKT8 324 aa17.84■□□□□ 0.45
PDLIM3-212ENST00000620787 PRSS38A1L453 326 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 SDC3O75056 442 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 KAT7O95251 611 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 CSF1P09603 554 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 TACSTD2P09758 323 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 MPPED2Q15777 294 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 C1orf53Q5VUE5 145 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 LRFN4Q6PJG9 635 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 TSSK4Q6SA08 328 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 ATRAIDQ6UW56 229 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 SLC16A9Q7RTY1 509 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 FAM220AQ7Z4H9 259 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 TSSK2Q96PF2 358 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 DPP7Q9UHL4 492 aa17.83■□□□□ 0.45
PDLIM3-212ENST00000620787 A0A0C4DFX4 3053 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 A0A1B0GTH9 108 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 GRXCR1A8MXD5 290 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 H0YC42 278 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 H0YGG7 62 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 TIMP1P01033 207 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 MAS1P04201 325 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 FCER2P06734 321 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 ANXA2P07355 339 aaKnown RBP17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 RPA2P15927 270 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 ARF3P61204 181 aaPredicted RBP17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 GUCA2AQ02747 115 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 PRRT3Q5FWE3 981 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 ZNF227Q86WZ6 799 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 EXD3Q8N9H8 876 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 OR6K3Q8NGY3 331 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 FGF13Q92913 245 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 RBM18Q96H35 190 aaKnown RBP17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 GPX7Q96SL4 187 aaPredicted RBP17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 LMF2Q9BU23 707 aaKnown RBP17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 STEAP1Q9UHE8 339 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 ATG2BQ96BY7 2078 aa17.83■□□□□ 0.44
PDLIM3-212ENST00000620787 TRBV5-7A0A0A0MS05 114 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 GGT3PA6NGU5 568 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 RLN2P04090 185 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 EFNB2P52799 333 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 PRMT2P55345 433 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 SCAND1P57086 179 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 ETFDHQ16134 617 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 ZNF595Q8IYB9 648 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 CA13Q8N1Q1 262 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 C12orf76Q8N812 135 aaPredicted RBP17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 OR51S1Q8NGJ8 323 aa17.82■□□□□ 0.44
PDLIM3-212ENST00000620787 ZNF296Q8WUU4 475 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms