RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PIK3C3Q8NEB9 887 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 MRPL39Q9NYK5 338 aaKnown RBP14.94□□□□□ -0.02
HMGN3-203ENST00000620514 CRNNQ9UBG3 495 aaPredicted RBP14.94□□□□□ -0.02
HMGN3-203ENST00000620514 USP22Q9UPT9 525 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 SLC35F4A4IF30 521 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 H7C417 338 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 PLPP3O14495 311 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 CHP2O43745 196 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 AKAP8O43823 692 aaKnown RBP14.93□□□□□ -0.02
HMGN3-203ENST00000620514 SERPINI2O75830 405 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 IGLV1-44P01699 117 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 CALCRP30988 508 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 NAAAQ02083 359 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 PUDPQ08623 228 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 CYLC2Q14093 348 aaPredicted RBP14.93□□□□□ -0.02
HMGN3-203ENST00000620514 REP15Q6BDI9 236 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 CALHM3Q86XJ0 350 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 C20orf196Q8IYI0 205 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 ANKK1Q8NFD2 765 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 SLC26A7Q8TE54 656 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 ADAMTS16Q8TE57 1224 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 LRRC58Q96CX6 371 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 FBXO17Q96EF6 278 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 ZNF317Q96PQ6 595 aaPredicted RBP14.93□□□□□ -0.02
HMGN3-203ENST00000620514 KATNB1Q9BVA0 655 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 SAR1AQ9NR31 198 aa14.93□□□□□ -0.02
HMGN3-203ENST00000620514 C11orf98E9PRG8 122 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 MRASO14807 208 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 LY6HO94772 140 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 VIMP08670 466 aaKnown RBP14.92□□□□□ -0.02
HMGN3-203ENST00000620514 HOXB1P14653 301 aaPredicted RBP14.92□□□□□ -0.02
HMGN3-203ENST00000620514 AHCYP23526 432 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 PPP2R2BQ00005 443 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 CAMK2DQ13557 499 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 MMEL1Q495T6 779 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 INTS11Q5TA45 600 aaKnown RBP14.92□□□□□ -0.02
HMGN3-203ENST00000620514 CCDC80Q76M96 950 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 SNX32Q86XE0 403 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 PRIMA1Q86XR5 153 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 ZNF525Q8N782 197 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 OR10H5Q8NGA6 315 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 KCNS3Q9BQ31 491 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 RHNO1Q9BSD3 238 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 SLC7A7Q9UM01 511 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 NOX1Q9Y5S8 564 aa14.92□□□□□ -0.02
HMGN3-203ENST00000620514 ANK3Q12955 4377 aaKnown RBP14.92□□□□□ -0.02
HMGN3-203ENST00000620514 ABCA2Q9BZC7 2435 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 LOC100653049A0A140TA62 436 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 TRAPPC13A5PLN9 417 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 ZNF99A8MXY4 864 aaPredicted RBP14.91□□□□□ -0.02
HMGN3-203ENST00000620514 KPNA4O00629 521 aaPredicted RBP14.91□□□□□ -0.02
HMGN3-203ENST00000620514 KRT34O76011 436 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 CH25HO95992 272 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 IGKV3-15P01624 115 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 CRYAAP02489 173 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 ADORA3P0DMS8 318 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 CBR1P16152 277 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 TNFRSF1BP20333 461 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 IDH3GP51553 393 aaPredicted RBP14.91□□□□□ -0.02
HMGN3-203ENST00000620514 GUCY1A3Q02108 690 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 CHRNB3Q05901 458 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 ZNF74Q16587 644 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 SWI5Q1ZZU3 235 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 C3orf36Q3SXR2 165 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 TTC33Q6PID6 262 aaPredicted RBP14.91□□□□□ -0.02
HMGN3-203ENST00000620514 VHLLQ6RSH7 139 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 CLEC2AQ6UVW9 174 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 PXKQ7Z7A4 578 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 LRRC17Q8N6Y2 441 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 OR8J3Q8NGG0 315 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 OR5J2Q8NH18 312 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 CA10Q9NS85 328 aa14.91□□□□□ -0.02
HMGN3-203ENST00000620514 A0A096LNT2 108 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 GPRIN2O60269 458 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 MT-ATP6P00846 226 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 PAX7P23759 505 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 CAPZA2P47755 286 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 HGFACQ04756 655 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 NPRL3Q12980 569 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 COQ5Q5HYK3 327 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 MDP1Q86V88 176 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 CARM1Q86X55 608 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 FAM169BQ8N8A8 192 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 LRR1Q96L50 414 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 ZNF583Q96ND8 569 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 SH3GL1Q99961 368 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 ECSITQ9BQ95 431 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 PRSS27Q9BQR3 290 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 PCDHAC1Q9H158 963 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 NOX3Q9HBY0 568 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 PMF1-BGLAPU3KQ54 211 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 ABCA1O95477 2261 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 JMJD1CQ15652 2540 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 ARFGEF3Q5TH69 2177 aa14.9□□□□□ -0.02
HMGN3-203ENST00000620514 ZNF726A6NNF4 738 aa14.89□□□□□ -0.03
HMGN3-203ENST00000620514 BBIP1A8MTZ0 92 aa14.89□□□□□ -0.03
HMGN3-203ENST00000620514 SHOX2O60902 331 aaPredicted RBP14.89□□□□□ -0.03
HMGN3-203ENST00000620514 OR6A2O95222 327 aa14.89□□□□□ -0.03
HMGN3-203ENST00000620514 HLA-HP01893 362 aa14.89□□□□□ -0.03
HMGN3-203ENST00000620514 IFNGR1P15260 489 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms