RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 SDC1P18827 310 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 ABCD3P28288 659 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 ECI1P42126 302 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 GABARAPL2P60520 117 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 RPS4XP62701 263 aaKnown RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 CTAG1AP78358 180 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 PTGR1Q14914 329 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 ARHGAP11BQ3KRB8 267 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 TOR2AQ5JU69 321 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 ZBTB49Q6ZSB9 765 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 C1QL2Q7Z5L3 287 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 METTL6Q8TCB7 284 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 PNPT1Q8TCS8 783 aaKnown RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 NEU4Q8WWR8 484 aaPredicted RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 TSLPQ969D9 159 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 AURKBQ96GD4 344 aaPredicted RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 SENP5Q96HI0 755 aaPredicted RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 REXO5Q96IC2 774 aaKnown RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 BCL2L10Q9HD36 194 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 C1orf109Q9NX04 203 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 ARL15Q9NXU5 204 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 NUFIP1Q9UHK0 495 aaKnown RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 ING1Q9UK53 422 aaPredicted RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 EMC9Q9Y3B6 208 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 SPIN1Q9Y657 262 aaPredicted RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 ANKDD1BA6NHY2 528 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 EI24O14681 340 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 SMAD9O15198 467 aaKnown RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 NPIPB7O75200 414 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 SEC14L2O76054 403 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 OR7A10O76100 309 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 INMTO95050 263 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 PTBP3O95758 552 aaKnown RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 NCK1P16333 377 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 GPX2P18283 190 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 CCNA2P20248 432 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 G0S2P27469 103 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 GDF5P43026 501 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 LIMS1P48059 325 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 MVDP53602 400 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 POLR2GP62487 172 aaKnown RBP eCLIP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 SLAMF1Q13291 335 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 RBMS2Q15434 407 aaKnown RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 ZBED5Q49AG3 693 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 GALNTL5Q7Z4T8 443 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 LIX1LQ8IVB5 337 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 SVOPLQ8N434 492 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 BVESQ8NE79 360 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 OR13F1Q8NGS4 319 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 FAM168AQ92567 244 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 MISP3Q96FF7 219 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 SH3YL1Q96HL8 342 aaPredicted RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 GNRHR2Q96P88 292 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 IL17FQ96PD4 163 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 BCL2L14Q9BZR8 327 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 ZNF350Q9GZX5 532 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 PIGUQ9H490 435 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 FOLH1BQ9HBA9 442 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 MRPL39Q9NYK5 338 aaKnown RBP4.79□□□□□ -1.64
CBWD3-215ENST00000619322 OPTCQ9UBM4 332 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 LIPGQ9Y5X9 500 aa4.79□□□□□ -1.64
CBWD3-215ENST00000619322 VAMP5O95183 116 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 LY86O95711 162 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 TFP02787 698 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 CCL3P10147 92 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 COX5BP10606 129 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 CBR1P16152 277 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 CTRB1P17538 263 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 APOBEC1P41238 236 aaKnown RBP4.78□□□□□ -1.64
CBWD3-215ENST00000619322 CDKN2CP42773 168 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 GZMKP49863 264 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 DGKQP52824 942 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 MTPNP58546 118 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 NAE1Q13564 534 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 HEPACAMQ14CZ8 416 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 CYP51A1Q16850 503 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 ZFP69Q49AA0 526 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 ANKRD39Q53RE8 183 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 CPTPQ5TA50 214 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 CTRB2Q6GPI1 263 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 GLYATQ6IB77 296 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 ABHD12BQ7Z5M8 362 aaPredicted RBP4.78□□□□□ -1.64
CBWD3-215ENST00000619322 TSEN54Q7Z6J9 526 aaKnown RBP4.78□□□□□ -1.64
CBWD3-215ENST00000619322 TMEM179BQ7Z7N9 219 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 PTOV1Q86YD1 416 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 ANKRD13BQ86YJ7 626 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 RFLNBQ8N5W9 214 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 KRTCAP2Q8N6L1 136 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 OR52N2Q8NGI0 321 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 OR10Q1Q8NGQ4 319 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 PIGXQ8TBF5 258 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 SLC41A3Q96GZ6 507 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 PRAP1Q96NZ9 151 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 TRIM2Q9C040 744 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 NDRG3Q9UGV2 375 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 TMCC3Q9ULS5 477 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 FAM157AC9JC47 383 aa4.78□□□□□ -1.64
CBWD3-215ENST00000619322 TRAF3IP2O43734 574 aaPredicted RBP4.78□□□□□ -1.64
CBWD3-215ENST00000619322 CDC40O60508 579 aaKnown RBP eCLIP4.78□□□□□ -1.64
CBWD3-215ENST00000619322 SNAP29O95721 258 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms