RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 AHCYP23526 432 aa17.48■□□□□ 0.39
UPF3A-211ENST00000618700 ARHGDIAP52565 204 aa17.48■□□□□ 0.39
UPF3A-211ENST00000618700 PRPS1P60891 318 aa17.48■□□□□ 0.39
UPF3A-211ENST00000618700 IL1RL1Q01638 556 aa17.48■□□□□ 0.39
UPF3A-211ENST00000618700 ALG10Q5BKT4 473 aa17.48■□□□□ 0.39
UPF3A-211ENST00000618700 FAHD1Q6P587 224 aa17.48■□□□□ 0.39
UPF3A-211ENST00000618700 ZNF620Q6ZNG0 422 aa17.48■□□□□ 0.39
UPF3A-211ENST00000618700 ZDHHC13Q8IUH4 622 aa17.48■□□□□ 0.39
UPF3A-211ENST00000618700 ZNF808Q8N4W9 903 aaPredicted RBP17.48■□□□□ 0.39
UPF3A-211ENST00000618700 GTPBP3Q969Y2 492 aaKnown RBP17.48■□□□□ 0.39
UPF3A-211ENST00000618700 GPX7Q96SL4 187 aaPredicted RBP17.48■□□□□ 0.39
UPF3A-211ENST00000618700 PIGMQ9H3S5 423 aa17.48■□□□□ 0.39
UPF3A-211ENST00000618700 OAZ3Q9UMX2 235 aa17.48■□□□□ 0.39
UPF3A-211ENST00000618700 RCE1Q9Y256 329 aa17.48■□□□□ 0.39
UPF3A-211ENST00000618700 NOSIPQ9Y314 301 aaKnown RBP17.48■□□□□ 0.39
UPF3A-211ENST00000618700 G3V2T6 193 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 DVL2O14641 736 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 F13BP05160 661 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 RNF224P0DH78 156 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 ANXA8P13928 327 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 GSTM3P21266 225 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 C1DQ13901 141 aaKnown RBP17.47■□□□□ 0.39
UPF3A-211ENST00000618700 RCN1Q15293 331 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 CDSNQ15517 529 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 SMARCD3Q6STE5 483 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 TFAP2EQ6VUC0 442 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 RASSF6Q6ZTQ3 369 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 MRGPRGQ86SM5 289 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 FAM26EQ8N5C1 309 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 LILRB4Q8NHJ6 448 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 FANK1Q8TC84 345 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 C12orf49Q9H741 205 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 PLSCR4Q9NRQ2 329 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 INIPQ9NRY2 104 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 JKAMPQ9P055 326 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 CDH10Q9Y6N8 788 aa17.47■□□□□ 0.39
UPF3A-211ENST00000618700 SAC3D1A6NKF1 404 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 MCIDASD6RGH6 385 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 ZNF432O94892 652 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 AGFG2O95081 481 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 NDUFB2O95178 105 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 IGHMP01871 453 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 TP53P04637 393 aaPredicted RBP17.46■□□□□ 0.39
UPF3A-211ENST00000618700 EDNRAP25101 427 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 OR3A2P47893 321 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 CLDN17P56750 224 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 COX10Q12887 443 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 SLC25A35Q3KQZ1 300 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 ANKRD34AQ69YU3 496 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 XKRXQ6PP77 449 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 CASP12Q6UXS9 341 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 SLC35D2Q76EJ3 337 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 IGFN1Q86VF2 1251 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 KIF18BQ86Y91 864 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 WDFY1Q8IWB7 410 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 CLDN22Q8N7P3 220 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 ICA1LQ8NDH6 482 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 ENKD1Q9H0I2 346 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 OR52D1Q9H346 318 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 PROCRQ9UNN8 238 aa17.46■□□□□ 0.39
UPF3A-211ENST00000618700 MSTNO14793 375 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 AKAP8O43823 692 aaKnown RBP17.45■□□□□ 0.38
UPF3A-211ENST00000618700 MRPL33O75394 65 aaKnown RBP17.45■□□□□ 0.38
UPF3A-211ENST00000618700 SERPINI2O75830 405 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 ANPEPP15144 967 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 IFNGR1P15260 489 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 SELENOPP49908 381 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 KLHL17Q6TDP4 642 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 AAED1Q7RTV5 226 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 STK32CQ86UX6 486 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 TMEM123Q8N131 208 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 ATG16L2Q8NAA4 619 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 DNAJC9Q8WXX5 260 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 TXNDC15Q96J42 360 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 OR2M2Q96R28 347 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 UCK2Q9BZX2 261 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 NDEL1Q9GZM8 345 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 OPN3Q9H1Y3 402 aaPredicted RBP17.45■□□□□ 0.38
UPF3A-211ENST00000618700 NRIP3Q9NQ35 241 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 PARPBPQ9NWS1 579 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 MED29Q9NX70 200 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 IL20Q9NYY1 176 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 REV1Q9UBZ9 1251 aa17.45■□□□□ 0.38
UPF3A-211ENST00000618700 A0A1W2PRG6 482 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 A8MXE2 369 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 EEF1E1-BLOC1S5C9J1V9 151 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 EEF1E1O43324 174 aaKnown RBP17.44■□□□□ 0.38
UPF3A-211ENST00000618700 SMNDC1O75940 238 aaKnown RBP eCLIP17.44■□□□□ 0.381e-7■■■□□ 15.1
UPF3A-211ENST00000618700 BAG2O95816 211 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 CD14P08571 375 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 DAPP51397 102 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 DAP3P51398 398 aaKnown RBP17.44■□□□□ 0.38
UPF3A-211ENST00000618700 CTXN1P60606 82 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 GUCA2AQ02747 115 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 MELKQ14680 651 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 TAF11Q15544 211 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 ACKR1Q16570 336 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 RFX4Q33E94 735 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 RPL13AP3Q6NVV1 102 aa17.44■□□□□ 0.38
UPF3A-211ENST00000618700 NIPAL3Q6P499 406 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms