RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 EGLN3Q9H6Z9 239 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 PARPBPQ9NWS1 579 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 MED29Q9NX70 200 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 COQ3Q9NZJ6 369 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 STX18Q9P2W9 335 aaKnown RBP13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 REV1Q9UBZ9 1251 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 ZNF629Q9UEG4 869 aaPredicted RBP13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 CDH10Q9Y6N8 788 aa13.86□□□□□ -0.19
PCDHGC3-204ENST00000617222 ZNF726A6NNF4 738 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 DVL2O14641 736 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 MGRN1O60291 552 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 ZG16O60844 167 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 MITFO75030 526 aaPredicted RBP13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 SMNDC1O75940 238 aaKnown RBP eCLIP13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 SOX14O95416 240 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 TP53P04637 393 aaPredicted RBP13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 CD14P08571 375 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 SLC6A6P31641 620 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 ERVK-25P63136 954 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 TOP3AQ13472 1001 aaPredicted RBP13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 TRIP10Q15642 601 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 ACKR1Q16570 336 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 NIPAL3Q6P499 406 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 CASP12Q6UXS9 341 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 ZBTB49Q6ZSB9 765 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 MRGPRGQ86SM5 289 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 ZNF100Q8IYN0 542 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 CBR4Q8N4T8 237 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 ASB5Q8WWX0 329 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 EME1Q96AY2 570 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 RBM4BQ9BQ04 359 aaKnown RBP13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 C9orf16Q9BUW7 83 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 KATNB1Q9BVA0 655 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 RBM4Q9BWF3 364 aaKnown RBP13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 OSBPL10Q9BXB5 764 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 PAPOLBQ9NRJ5 636 aaKnown RBP13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 IL20Q9NYY1 176 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 ZNF346Q9UL40 294 aaKnown RBP13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 PROCRQ9UNN8 238 aa13.85□□□□□ -0.19
PCDHGC3-204ENST00000617222 MED12LQ86YW9 2145 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 DOCK7Q96N67 2140 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 SLC35F4A4IF30 521 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 CGAP01215 116 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 OSMP13725 252 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 EDNRAP25101 427 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 POU1F1P28069 291 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 CHRNB4P30926 498 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 SELENOPP49908 381 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 BIDP55957 195 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 PPP2R2BQ00005 443 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 MELKQ14680 651 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 SLC36A3Q495N2 470 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 CLEC12AQ5QGZ9 265 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 CARD17Q5XLA6 110 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 KDM4DQ6B0I6 523 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 DPY19L2P2Q6ZN68 376 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 WDFY1Q8IWB7 410 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 CLDN22Q8N7P3 220 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 OR52L1Q8NGH7 329 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 DNAJC9Q8WXX5 260 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 APH1AQ96BI3 265 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 SLC29A1Q99808 456 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 IFT27Q9BW83 186 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 TSSK6Q9BXA6 273 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 POLDIP3Q9BY77 421 aaKnown RBP13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 PLA2G12AQ9BZM1 189 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 OPN3Q9H1Y3 402 aaPredicted RBP13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 TXNIPQ9H3M7 391 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 RNPEPL1Q9HAU8 725 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 PLSCR4Q9NRQ2 329 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 KRT84Q9NSB2 600 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 POFUT2Q9Y2G5 429 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 IER3IP1Q9Y5U9 82 aa13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 PHF3Q92576 2039 aaKnown RBP13.84□□□□□ -0.19
PCDHGC3-204ENST00000617222 HIVEP3Q5T1R4 2406 aa13.83□□□□□ -0.19
PCDHGC3-204ENST00000617222 H3BN98 237 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 SOCS2O14508 198 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 EI24O14681 340 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 AKAP8O43823 692 aaKnown RBP13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 ZNF432O94892 652 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 AGFG2O95081 481 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 PPP1R3DO95685 299 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 OR3A2P47893 321 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 DAP3P51398 398 aaKnown RBP13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 RPL27P61353 136 aaKnown RBP13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 SLC34A1Q06495 639 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 CAMK2DQ13557 499 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 DAG1Q14118 895 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 LRRC36Q1X8D7 754 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 LPCAT4Q643R3 524 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 RPL13AP3Q6NVV1 102 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 ZNF610Q8N9Z0 462 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 RELL2Q8NC24 303 aaPredicted RBP13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 OR8D4Q8NGM9 314 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 OR6X1Q8NH79 312 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 LILRB4Q8NHJ6 448 aa13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 MAGEE2Q8TD90 523 aaPredicted RBP13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 ITLN2Q8WWU7 325 aaPredicted RBP13.83□□□□□ -0.2
PCDHGC3-204ENST00000617222 ASB10Q8WXI3 467 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms