RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 H3BNH8 94 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 LINC01387J3KSC0 135 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 EGR1P18146 543 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 TNFRSF1BP20333 461 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 EIF1AXP47813 144 aaKnown RBP15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 PNLIPRP2P54317 469 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 CCNJQ5T5M9 372 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 AP1ARQ63HQ0 302 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 SEZ6L2Q6UXD5 910 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 GGNQ86UU5 652 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 ZNF440Q8IYI8 595 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 ARHGDIGQ99819 225 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 APOL4Q9BPW4 351 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 PSD2Q9BQI7 771 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 FAIMQ9NVQ4 179 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 FBXO34Q9NWN3 711 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 SELENONQ9NZV5 590 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 MGAT4BQ9UQ53 548 aa15.53■□□□□ 0.08
TRAPPC3-209ENST00000616395 FADS1O60427 444 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 FCMRO60667 390 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 IL33O95760 270 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 HNF1AP20823 631 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 USF1P22415 310 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 YAP1P46937 504 aaKnown RBP15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 RNF144AP50876 292 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 ATP12AP54707 1039 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 LSM11P83369 360 aaKnown RBP eCLIP15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 GANABQ14697 944 aaKnown RBP15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 TRAM2Q15035 370 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 SLC36A3Q495N2 470 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 VRK2Q86Y07 508 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 C8orf59Q8N0T1 100 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 HSD17B8Q92506 261 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 FAM168AQ92567 244 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 HDHD5Q9BXW7 423 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 NMNAT1Q9HAN9 279 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 SMURF2Q9HAU4 748 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 HHATLQ9HCP6 504 aa15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 PAPOLBQ9NRJ5 636 aaKnown RBP15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 TESQ9UGI8 421 aaKnown RBP15.52■□□□□ 0.08
TRAPPC3-209ENST00000616395 LOC100289279A0A1B0GTE1 492 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 A0A1W2PRQ8 180 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 TMEM229AB2RXF0 380 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 SHISA9B4DS77 424 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 M0R3H8 397 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 EIF1AYO14602 144 aaKnown RBP15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 TCF21O43680 179 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 GMFGO60234 142 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 FMO6PO60774 539 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 UTS2O95399 124 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 RPS4Y1P22090 263 aaKnown RBP15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 MYF6P23409 242 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 IL32P24001 234 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 CLK3P49761 638 aaKnown RBP15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 GZMKP49863 264 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 UGT2B15P54855 530 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 DGCR6Q14129 220 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 IQCCQ4KMZ1 466 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 AGAP6Q5VW22 663 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 KDM4DQ6B0I6 523 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 APOOLQ6UXV4 268 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 MARCH3Q86UD3 253 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 OFCC1Q8IZS5 231 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 GABRG1Q8N1C3 465 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 RFLNBQ8N5W9 214 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 ZNF614Q8N883 585 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 C10orf105Q8TEF2 133 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 MCHR1Q99705 422 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 YTHDF1Q9BYJ9 559 aaKnown RBP15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 TOR3AQ9H497 397 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 TMEM27Q9HBJ8 222 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 UBQLN4Q9NRR5 601 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 ACER3Q9NUN7 267 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 SLC35A3Q9Y2D2 325 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 HSPE1-MOB4S4R3N1 261 aa15.51■□□□□ 0.07
TRAPPC3-209ENST00000616395 NPIPA5A0A0B4J1W7 369 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 SHISA8B8ZZ34 492 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 NPIPA7E9PJI5 369 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 SCDO00767 359 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 OR5F1O95221 314 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 NTN1O95631 604 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 SNAP29O95721 258 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 ADAP00813 363 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 NPIPA8P0DM63 369 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 GSTM3P21266 225 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 PRKACGP22612 351 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 AGTR1P30556 359 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 CDH11P55287 796 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 ZNF141Q15928 474 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 SFRP5Q5T4F7 317 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 FAHD1Q6P587 224 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 TTC33Q6PID6 262 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 TBPL2Q6SJ96 375 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 ZNF836Q6ZNA1 936 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 GATSQ8NAP1 163 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 OR52J3Q8NH60 311 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 OR10D3Q8NH80 312 aa15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 MSI2Q96DH6 328 aaKnown RBP15.5■□□□□ 0.07
TRAPPC3-209ENST00000616395 C1GALT1C1Q96EU7 318 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms