RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 SLC25A18Q9H1K4 315 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 GAR1Q9NY12 217 aaKnown RBP11.74□□□□□ -0.53
TCF4-248ENST00000616053 DOK2O60496 412 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 SRPX2O60687 465 aaPredicted RBP11.74□□□□□ -0.53
TCF4-248ENST00000616053 LYPLA2O95372 231 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 GLAP06280 429 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 FAM157BP0CG42 384 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 FOLR1P15328 257 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 OR7E24Q6IFN5 339 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 VRK2Q86Y07 508 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 KREMEN1Q96MU8 473 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 KCNA7Q96RP8 456 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 LRFN3Q9BTN0 628 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 PLK3Q9H4B4 646 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 MYO7AQ13402 2215 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 ZNF17P17021 662 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 PPP1CCP36873 323 aaKnown RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 PSMB10P40306 273 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 MAT1AQ00266 395 aaKnown RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 OR5AR1Q8NGP9 310 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 OR13C8Q8NGS7 320 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 ROBO4Q8WZ75 1007 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 ELF4Q99607 663 aaPredicted RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 TUBA4BQ9H853 241 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 PELI2Q9HAT8 420 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 MOB4Q9Y3A3 225 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 NAP1L6A6NFF2 107 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 POU3F3P20264 500 aaPredicted RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 TPBGQ13641 420 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 HENMT1Q5T8I9 393 aaKnown RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 OR5D18Q8NGL1 313 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 FGF21Q9NSA1 209 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 C5AR2Q9P296 337 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 NUP205Q92621 2012 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 DNMT1P26358 1616 aaKnown RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 ADAMTS13Q76LX8 1427 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 PIAS2O75928 621 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 CD40P25942 277 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 GK2Q14410 553 aaPredicted RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 RGS7BPQ6MZT1 257 aaPredicted RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 NDUFAF7Q7L592 441 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 NOCTQ9UK39 431 aaKnown RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 KCNE1P15382 129 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 EN2P19622 333 aaPredicted RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 SRPXP78539 464 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 CYP1B1Q16678 543 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 CCDC190Q86UF4 302 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 C19orf47Q8N9M1 422 aaKnown RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 OR2AK2Q8NG84 335 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 OR5M9Q8NGP3 310 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 CHODLQ9H9P2 273 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 SERPINE3A8MV23 424 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 ARPC5O15511 151 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 THBS1P07996 1170 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 PF4V1P10720 104 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 DHRS13Q6UX07 377 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 KRTCAP2Q8N6L1 136 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 C1orf123Q9NWV4 160 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 LOXL2Q9Y4K0 774 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 CHD5Q8TDI0 1954 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 PHF1O43189 567 aaPredicted RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 NAAAQ02083 359 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 ZNF260Q3ZCT1 412 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 OR6V1Q8N148 313 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 USP22Q9UPT9 525 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 POLDIP2Q9Y2S7 368 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 MEIKINA0A087WXM9 373 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 RPS10-NUDT3A0A1W2PQS6 291 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 TMEM221A6NGB7 291 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 FBXO24O75426 580 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 TNFRSF1AP19438 455 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 RPS10P46783 165 aaKnown RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 STUMQ69YW2 141 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 YRDCQ86U90 279 aaKnown RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 OR52E1Q8NGJ3 308 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 BCL7CQ8WUZ0 217 aaPredicted RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 HSD17B14Q9BPX1 270 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 PURGQ9UJV8 347 aaKnown RBP11.73□□□□□ -0.53
TCF4-248ENST00000616053 SHROOM2Q13796 1616 aa11.73□□□□□ -0.53
TCF4-248ENST00000616053 RFXAPO00287 272 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 SPINT3P49223 89 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 PRR27Q6MZM9 219 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 ASB17Q8WXJ9 295 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 FAXDC2Q96IV6 333 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 TRBV23-1A0A0A0MS06 115 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 MAGEB4O15481 346 aaPredicted RBP11.72□□□□□ -0.53
TCF4-248ENST00000616053 SPRY3O43610 288 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 SBK2P0C263 348 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 LAP3P28838 519 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 OR1D5P58170 312 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 RIPPLY1Q0D2K3 151 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 ANKRD22Q5VYY1 191 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 BATF2Q8N1L9 274 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 TFAP2BQ92481 460 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 H3BNC9 293 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 NTF3P20783 257 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 MFSD4AQ8N468 514 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 OR52N5Q8NH56 324 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 HRH4Q9H3N8 390 aa11.72□□□□□ -0.53
TCF4-248ENST00000616053 NRG2O14511 850 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms