RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 CXCL12P48061 93 aa12.86□□□□□ -0.35
SSBP2-220ENST00000615665 SYT9Q86SS6 491 aa12.86□□□□□ -0.35
SSBP2-220ENST00000615665 OR56B4Q8NH76 319 aa12.86□□□□□ -0.35
SSBP2-220ENST00000615665 TSLPQ969D9 159 aa12.86□□□□□ -0.35
SSBP2-220ENST00000615665 NXF2Q9GZY0 626 aaKnown RBP12.86□□□□□ -0.35
SSBP2-220ENST00000615665 HPF1Q9NWY4 346 aa12.86□□□□□ -0.35
SSBP2-220ENST00000615665 DNAJB12Q9NXW2 375 aaKnown RBP12.86□□□□□ -0.35
SSBP2-220ENST00000615665 TMED7Q9Y3B3 224 aa12.86□□□□□ -0.35
SSBP2-220ENST00000615665 SSX4O60224 188 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 CBX7O95931 251 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 CD79BP40259 229 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 FAM189A2Q15884 450 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 CCDC58Q4VC31 144 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 BTN2A1Q7KYR7 527 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 OVCH1Q7RTY7 1134 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 FOXRED2Q8IWF2 684 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 FTMTQ8N4E7 242 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 CTRCQ99895 268 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 LSM2Q9Y333 95 aaKnown RBP12.85□□□□□ -0.35
SSBP2-220ENST00000615665 ZNF208O43345 1280 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 EIF4EP06730 217 aaKnown RBP12.85□□□□□ -0.35
SSBP2-220ENST00000615665 HLA-DMAP28067 261 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 ZNF704Q6ZNC4 412 aaPredicted RBP12.85□□□□□ -0.35
SSBP2-220ENST00000615665 NXF5Q9H1B4 397 aaKnown RBP12.85□□□□□ -0.35
SSBP2-220ENST00000615665 TMEM185BQ9H7F4 350 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 DKKL1Q9UK85 242 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 FBXL3Q9UKT7 428 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 TRIM64BA6NI03 449 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 CDK10Q15131 360 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 LIPNQ5VXI9 398 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 UEVLDQ8IX04 471 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 OR4C3Q8NH37 302 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 LILRB4Q8NHJ6 448 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 GIMAP1Q8WWP7 306 aa12.85□□□□□ -0.35
SSBP2-220ENST00000615665 PRKACBP22694 351 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 SDHAP31040 664 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 KIR2DL3P43628 341 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 SRP9P49458 86 aaKnown RBP12.84□□□□□ -0.35
SSBP2-220ENST00000615665 AFF3P51826 1226 aaKnown RBP12.84□□□□□ -0.35
SSBP2-220ENST00000615665 OC90Q02509 493 aaPredicted RBP12.84□□□□□ -0.35
SSBP2-220ENST00000615665 SGCAQ16586 387 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 PM20D2Q8IYS1 436 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 VWCEQ96DN2 955 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 UBQLN2Q9UHD9 624 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 A0A087WUJ7 227 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 GALP22466 123 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 PTH2RP49190 550 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 FCN2Q15485 313 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 APOOLQ6UXV4 268 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 ABI3BPQ7Z7G0 1075 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 C10orf90Q96M02 699 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 LIN7BQ9HAP6 207 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 HHLA2Q9UM44 414 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 TRBV11-1A0A0K0K1C0 115 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 A0A1B0GX78 115 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 C5orf51A6NDU8 294 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 LILRA5A6NI73 299 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 ITGA5P08648 1049 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 CSF1P09603 554 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 POU3F1Q03052 451 aaPredicted RBP12.84□□□□□ -0.35
SSBP2-220ENST00000615665 FAPQ12884 760 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 SQSTM1Q13501 440 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 TMEM205Q6UW68 189 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 ZNF615Q8N8J6 731 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 TSSK2Q96PF2 358 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 PRRG4Q9BZD6 226 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 NIPAL2Q9H841 368 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 V9GYH0 126 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 TRABD2BA6NFA1 517 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 CYR61O00622 381 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 EIF4E2O60573 245 aaKnown RBP12.84□□□□□ -0.35
SSBP2-220ENST00000615665 SRFP11831 508 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 BTG1P62324 171 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 PNPLA2Q96AD5 504 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 ERVMER34-1Q9H9K5 563 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 NOX3Q9HBY0 568 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 MRPS18AQ9NVS2 196 aaKnown RBP12.84□□□□□ -0.35
SSBP2-220ENST00000615665 PLEKHA6Q9Y2H5 1048 aa12.84□□□□□ -0.35
SSBP2-220ENST00000615665 OR14I1A6ND48 311 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 PRICKLE3O43900 615 aaPredicted RBP12.83□□□□□ -0.36
SSBP2-220ENST00000615665 SNAPC5O75971 98 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 TFP02787 698 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 ERCC1P07992 297 aaPredicted RBP12.83□□□□□ -0.36
SSBP2-220ENST00000615665 CAPZA1P52907 286 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 DLX2Q07687 328 aaPredicted RBP12.83□□□□□ -0.36
SSBP2-220ENST00000615665 VWA2Q5GFL6 755 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 PRSS45Q7RTY3 260 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 SLC25A44Q96H78 314 aaPredicted RBP12.83□□□□□ -0.36
SSBP2-220ENST00000615665 PHF7Q9BWX1 381 aaPredicted RBP12.83□□□□□ -0.36
SSBP2-220ENST00000615665 MYEF2Q9P2K5 600 aaKnown RBP12.83□□□□□ -0.36
SSBP2-220ENST00000615665 CENPVL1A0A0U1RR11 272 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 A8MVM7 634 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 PEX14O75381 377 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 CRYZL1O95825 349 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 TBX6O95947 436 aaPredicted RBP12.83□□□□□ -0.36
SSBP2-220ENST00000615665 PSMB1P20618 241 aaKnown RBP12.83□□□□□ -0.36
SSBP2-220ENST00000615665 CCR6P51684 374 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 PRKXP51817 358 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 MEP1BQ16820 701 aa12.83□□□□□ -0.36
SSBP2-220ENST00000615665 ZNF658BQ4V348 819 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms