RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 NIPSNAP1Q9BPW8 284 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 GPR87Q9BY21 358 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF768Q9H5H4 540 aaKnown RBP8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF175Q9Y473 711 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 TRAPPC2LH3BP13 241 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 GNAO1P09471 354 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 PNLIPP16233 465 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 STOMP27105 288 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 EMP3P54852 163 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 RELAQ04206 551 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 MESP2Q0VG99 397 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF684Q5T5D7 378 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 PWWP2BQ6NUJ5 590 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 DPY19L4Q7Z388 723 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 OR2L13Q8N349 312 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 OR5H2Q8NGV7 314 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC7A13Q8TCU3 470 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 Q96M85 177 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC6A7Q99884 636 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC6A15Q9H2J7 730 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 LHX9Q9NQ69 397 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 PROCRQ9UNN8 238 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 BRCA1P38398 1863 aaKnown RBP8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 C13orf42A0A1B0GVH6 325 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 ATG12O94817 140 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 GLSO94925 669 aaPredicted RBP8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 PRSS3P35030 304 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 GRB2P62993 217 aaKnown RBP8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 CDK10Q15131 360 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 TBC1D28Q2M2D7 210 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 VHLLQ6RSH7 139 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 KCTD9Q7L273 389 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 CENPSQ8N2Z9 138 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 RAB39BQ96DA2 213 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 LRFN5Q96NI6 719 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 NDRG4Q9ULP0 352 aaKnown RBP8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 HDGFL3Q9Y3E1 203 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 V9GY05 133 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 TRIOBPQ9H2D6 2365 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF638Q14966 1978 aaKnown RBP8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 A0A087WUU8 490 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 KRBA1A5PL33 1030 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 ANKUB1A6NFN9 424 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 OR2AT4A6NND4 320 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 TSPAN4O14817 238 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 SURF4O15260 269 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 SERPINA7P05543 415 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 MAP2K3P46734 347 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 DSCR4P56555 118 aaPredicted RBP8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 S100A10P60903 97 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 GPR176Q14439 515 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 ZIC1Q15915 447 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 CREB3L1Q96BA8 519 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 RASD2Q96D21 266 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 TRIB1Q96RU8 372 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC25A18Q9H1K4 315 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 ACER3Q9NUN7 267 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 PLEKHJ1Q9NW61 149 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 B3GALT5Q9Y2C3 310 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 OR2W5A6NFC9 320 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 NKX2-2O95096 273 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 IFNA7P01567 189 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 ARSBP15848 533 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 YBX1P67809 324 aaKnown RBP8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 MAB21L1Q13394 359 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 SNTB2Q13425 540 aaKnown RBP8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF181Q2M3W8 571 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 RTL6Q6ICC9 239 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 STEAP2Q8NFT2 490 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 STK35Q8TDR2 534 aa8.64□□□□□ -1.03
CLTCL1-208ENST00000615606 INMT-MINDY4F8WBC2 141 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC16A6O15403 523 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 CXCL13O43927 109 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 LPLP06858 475 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 TBXA2RP21731 343 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 PPP1CAP62136 330 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 RAE1P78406 368 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 NKG7Q16617 165 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 SYT14P1Q58G82 188 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF687Q8N1G0 1237 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 SIMC1Q8NDZ2 872 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 GCDHQ92947 438 aaPredicted RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 FAM60AQ9NP50 221 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 PRDM6Q9NQX0 595 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 MED16Q9Y2X0 877 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 A0A1W2PNR3 127 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 KANTRA0A1W2PQU2 76 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 FZD7O75084 574 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 DBHP09172 617 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 ATF4P18848 351 aaPredicted RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 C21orf33P30042 268 aaPredicted RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 RPS23P62266 143 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 KDM4DQ6B0I6 523 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 ZBTB8BQ8NAP8 495 aaPredicted RBP8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 CSNK2A3Q8NEV1 391 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 TCEAL3Q969E4 200 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 OXGR1Q96P68 337 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 SORCS2Q96PQ0 1159 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 ZNF225Q9UK10 706 aa8.63□□□□□ -1.03
CLTCL1-208ENST00000615606 EDARQ9UNE0 448 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms