RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 PIGXQ8TBF5 258 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 PROX1Q92786 737 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 FAM162AQ96A26 154 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 SLC47A1Q96FL8 570 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 TNFRSF13CQ96RJ3 184 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 SEPHS2Q99611 448 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 SH3GL3Q99963 347 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 SPATA5L1Q9BVQ7 753 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 TRIM2Q9C040 744 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 OR51B6Q9H340 312 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 TMEM45AQ9NWC5 275 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 ELOVL5Q9NYP7 299 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 TAS2R1Q9NYW7 299 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 SLC13A4Q9UKG4 626 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 MOKQ9UQ07 419 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 TRAPPC13A5PLN9 417 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 OR5H1A6NKK0 313 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 CASKO14936 926 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 ARPC2O15144 300 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 FAM107AO95990 144 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 ASAH2BP0C7U1 165 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 NPRL3Q12980 569 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 VEZF1Q14119 521 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 PAQR4Q8N4S7 273 aaPredicted RBP4.98□□□□□ -1.61
CPNE3-208ENST00000614678 BCAS4Q8TDM0 211 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 FAM46AQ96IP4 442 aaKnown RBP4.98□□□□□ -1.61
CPNE3-208ENST00000614678 SLCO5A1Q9H2Y9 848 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 NMNAT1Q9HAN9 279 aaPredicted RBP4.98□□□□□ -1.61
CPNE3-208ENST00000614678 SPAG4Q9NPE6 437 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 UPB1Q9UBR1 384 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 TAGLN3Q9UI15 199 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 FZR1Q9UM11 496 aa4.98□□□□□ -1.61
CPNE3-208ENST00000614678 E7EQL1 145 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 SLC9A3P48764 834 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 PUDPQ08623 228 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 PPA1Q15181 289 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 MAPRE2Q15555 327 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 GTF2IRD2BQ6EKJ0 949 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 VHLLQ6RSH7 139 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 GTF2IRD2Q86UP8 949 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 STK32CQ86UX6 486 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 HS3ST5Q8IZT8 346 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 STK35Q8TDR2 534 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 DNAJA4Q8WW22 397 aaPredicted RBP4.97□□□□□ -1.61
CPNE3-208ENST00000614678 TMEM239Q8WW34 195 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 NANSQ9NR45 359 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 SPIN1Q9Y657 262 aaPredicted RBP4.97□□□□□ -1.61
CPNE3-208ENST00000614678 U3KQV3 271 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 SH3PXD2BA1X283 911 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 MCIDASD6RGH6 385 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 GSTA4O15217 222 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 RNF13O43567 381 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 IFI30P13284 250 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 UQCRBP14927 111 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 PRSS12P56730 875 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 MXRA7P84157 204 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 P2RY6Q15077 328 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 NCMAPQ5T1S8 102 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 PODNL1Q6PEZ8 512 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF613Q6PF04 617 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 PAMR1Q6UXH9 720 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 LRRC18Q8N456 261 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 PMM1Q92871 262 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 CMTM5Q96DZ9 223 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 MUS81Q96NY9 551 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 TSSK2Q96PF2 358 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 GPR35Q9HC97 309 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 TAS2R16Q9NYV7 291 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 ARHGAP32A7KAX9 2087 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 CHD3Q12873 2000 aaKnown RBP4.97□□□□□ -1.61
CPNE3-208ENST00000614678 IGHV1-18A0A0C4DH31 117 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 MPZL1O95297 269 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 ERVS71-1P61550 626 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 C1DQ13901 141 aaKnown RBP4.97□□□□□ -1.61
CPNE3-208ENST00000614678 TBRG1Q3YBR2 411 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 TMEM255AQ5JRV8 349 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 TTC33Q6PID6 262 aaPredicted RBP4.97□□□□□ -1.61
CPNE3-208ENST00000614678 LYPD4Q6UWN0 246 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 NSMAFQ92636 917 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 SLC7A6OSQ96CW6 309 aaPredicted RBP4.97□□□□□ -1.61
CPNE3-208ENST00000614678 CACYBPQ9HB71 228 aaKnown RBP4.97□□□□□ -1.61
CPNE3-208ENST00000614678 GLRX2Q9NS18 164 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 DCAF13Q9NV06 445 aaKnown RBP4.97□□□□□ -1.61
CPNE3-208ENST00000614678 FOXD3Q9UJU5 478 aaPredicted RBP4.97□□□□□ -1.61
CPNE3-208ENST00000614678 GPR52Q9Y2T5 361 aa4.97□□□□□ -1.61
CPNE3-208ENST00000614678 CR1P17927 2039 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 DCTN6O00399 190 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 EIF1BO60739 113 aaKnown RBP4.96□□□□□ -1.61
CPNE3-208ENST00000614678 ERVK-25P63136 954 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 TXNL4AP83876 142 aaKnown RBP4.96□□□□□ -1.61
CPNE3-208ENST00000614678 MFSD13AQ14CX5 517 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 ACKR1Q16570 336 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 FAM91A1Q658Y4 838 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 SLC35D2Q76EJ3 337 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 TMEM179BQ7Z7N9 219 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF584Q8IVC4 421 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 OR9Q2Q8NGE9 314 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 OR1K1Q8NGR3 316 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 OR5J2Q8NH18 312 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 ZNRF4Q8WWF5 429 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms