RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 MEMO1Q9Y316 297 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 FLVCR1Q9Y5Y0 555 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 A0A1B0GUH1 482 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 IMPA2O14732 288 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 IDH3BO43837 385 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 SS18L1O75177 396 aaPredicted RBP13.08□□□□□ -0.32
CD48-203ENST00000613788 IGHMP01871 453 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 IGFBP1P08833 259 aaPredicted RBP13.08□□□□□ -0.32
CD48-203ENST00000613788 APEHP13798 732 aaKnown RBP13.08□□□□□ -0.32
CD48-203ENST00000613788 IFNGR1P15260 489 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 GNLYP22749 145 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 NOS3P29474 1203 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 CEACAM8P31997 349 aaPredicted RBP13.08□□□□□ -0.32
CD48-203ENST00000613788 GIPRP48546 466 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 RPL27P61353 136 aaKnown RBP13.08□□□□□ -0.32
CD48-203ENST00000613788 ERVK-25P63136 954 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 ACKR1Q16570 336 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 CLEC12AQ5QGZ9 265 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 RIPPLY2Q5TAB7 128 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 EEF1A1P5Q5VTE0 462 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 GPR139Q6DWJ6 353 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 SLC27A4Q6P1M0 643 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 NHLRC1Q6VVB1 395 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 FAM214BQ7L5A3 538 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 HDDC2Q7Z4H3 204 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 RPRMLQ8N4K4 120 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 OR8D4Q8NGM9 314 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 PRR7Q8TB68 274 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 ZNF775Q96BV0 537 aaPredicted RBP13.08□□□□□ -0.32
CD48-203ENST00000613788 INTS12Q96CB8 462 aaKnown RBP13.08□□□□□ -0.32
CD48-203ENST00000613788 ADAD1Q96M93 576 aaKnown RBP13.08□□□□□ -0.32
CD48-203ENST00000613788 ERMAPQ96PL5 475 aaPredicted RBP13.08□□□□□ -0.32
CD48-203ENST00000613788 GABARAPL3Q9BY60 117 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 PLA2G12AQ9BZM1 189 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 RIBC2Q9H4K1 309 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 GRHPRQ9UBQ7 328 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 ZNF346Q9UL40 294 aaKnown RBP13.08□□□□□ -0.32
CD48-203ENST00000613788 CLEC4AQ9UMR7 237 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 NOSIPQ9Y314 301 aaKnown RBP13.08□□□□□ -0.32
CD48-203ENST00000613788 EMC9Q9Y3B6 208 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 IER3IP1Q9Y5U9 82 aa13.08□□□□□ -0.32
CD48-203ENST00000613788 ZNF726A6NNF4 738 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 HSPB2A8KAH6 182 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 H0YJX3 145 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 CCL21O00585 134 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 ARPC3O15145 178 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 TRAF3IP2O43734 574 aaPredicted RBP13.07□□□□□ -0.32
CD48-203ENST00000613788 PPP1R3DO95685 299 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 TMIGD3P0DMS9 266 aaPredicted RBP13.07□□□□□ -0.32
CD48-203ENST00000613788 VHLP40337 213 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 SMSP52788 366 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 CLDN17P56750 224 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 CDK5Q00535 292 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 GINS1Q14691 196 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 PTGES3Q15185 160 aaKnown RBP13.07□□□□□ -0.32
CD48-203ENST00000613788 HSPB2Q16082 182 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 ZIK1Q3SY52 487 aaPredicted RBP13.07□□□□□ -0.32
CD48-203ENST00000613788 FAM205BPQ63HN1 556 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 GCNT2Q8N0V5 402 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 LNX2Q8N448 690 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 ZIC4Q8N9L1 334 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 TMEM45BQ96B21 275 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 ZNF570Q96NI8 536 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 ZNF385AQ96PM9 386 aaKnown RBP13.07□□□□□ -0.32
CD48-203ENST00000613788 DMRTA2Q96SC8 542 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 TOR3AQ9H497 397 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 RCE1Q9Y256 329 aa13.07□□□□□ -0.32
CD48-203ENST00000613788 ZGRF1Q86YA3 2104 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 A6NIZ1 184 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 BHLHE40O14503 412 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 MRPL33O75394 65 aaKnown RBP13.06□□□□□ -0.32
CD48-203ENST00000613788 TOXO94900 526 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 SNAP29O95721 258 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 CTSSP25774 331 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 AGTR1P30556 359 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 SDHAP31040 664 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 BIDP55957 195 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 RAP1BP61224 184 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 RAP1AP62834 184 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 MYBPC1Q00872 1141 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 TOP3AQ13472 1001 aaPredicted RBP13.06□□□□□ -0.32
CD48-203ENST00000613788 MTFR2Q6P444 385 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 AAED1Q7RTV5 226 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 FAM122BQ7Z309 247 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 ARIH2OSQ8N7S6 290 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 OR6X1Q8NH79 312 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 RND1Q92730 232 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 TXNDC15Q96J42 360 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 TSPAN32Q96QS1 320 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 PRRG3Q9BZD7 231 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 SLC25A19Q9HC21 320 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 MED29Q9NX70 200 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 RALYQ9UKM9 306 aaKnown RBP13.06□□□□□ -0.32
CD48-203ENST00000613788 ADAM18Q9Y3Q7 739 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 ZFYVE26Q68DK2 2539 aa13.06□□□□□ -0.32
CD48-203ENST00000613788 SLC35F4A4IF30 521 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 ZAR1LA6NP61 321 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 XKRYO14609 159 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 TXNDC12O95881 172 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 HMGN1P05114 100 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms