RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 PPP2CBP62714 309 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 PPP2CAP67775 309 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 TNK1Q13470 666 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 LINC01555Q8NAE3 123 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 OR8D4Q8NGM9 314 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 MAFIPQ8WZ33 124 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 ZNF587Q96SQ5 575 aaPredicted RBP12.74□□□□□ -0.37
MUC1-223ENST00000611571 BARHL1Q9BZE3 327 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 CMC2Q9NRP2 79 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 SLC23A1Q9UHI7 598 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 NPFFR2Q9Y5X5 522 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 EP400Q96L91 3159 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 LINC01553A4QN01 128 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 FAM221BA6H8Z2 402 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 C9J4A7 227 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 SOD1P00441 154 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 CD14P08571 375 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 TUBG1P23258 451 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 GABRR1P24046 479 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 CDK2P24941 298 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 RABIFP47224 123 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 CCR9P51686 369 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 RBMS2Q15434 407 aaKnown RBP12.74□□□□□ -0.37
MUC1-223ENST00000611571 BEND4Q6ZU67 534 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 PRSS41Q7RTY9 318 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 ASB16Q96NS5 453 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 ATF6BQ99941 703 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 RGCCQ9H4X1 137 aa12.74□□□□□ -0.37
MUC1-223ENST00000611571 P2RY10O00398 339 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 NUDT21O43809 227 aaKnown RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 RAB40ALP0C0E4 278 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 ETV6P41212 452 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 FGL1Q08830 312 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 SRSF5Q13243 272 aaKnown RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 CAMK2DQ13557 499 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 SERTAD2Q14140 314 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 GLYR1Q49A26 553 aaPredicted RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 TCEAL6Q6IPX3 200 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 CORO6Q6QEF8 472 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 OR6V1Q8N148 313 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 RAB40AQ8WXH6 277 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 HHIPL1Q96JK4 782 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 DKKL1Q9UK85 242 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 MEGF11A6BM72 1044 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 H7C417 338 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 ZNF254O75437 659 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 APOC1P02654 83 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 CAV2P51636 162 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 STEAP1BQ6NZ63 245 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 FAM160A2Q8N612 972 aaPredicted RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 TP53I13Q8NBR0 393 aaPredicted RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 MAP6Q96JE9 813 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 GPATCH2Q9NW75 528 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 ROS1P08922 2347 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 CHP2O43745 196 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 ST6GAL1P15907 406 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 LUMP51884 338 aaPredicted RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 HNF4GQ14541 408 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 TMEM52BQ4KMG9 183 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 MEX3BQ6ZN04 569 aaKnown RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 KIAA1143Q96AT1 154 aaPredicted RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 MYADMQ96S97 322 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 DCLRE1CQ96SD1 692 aaKnown RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 ZNF649Q9BS31 505 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 KIR3DX1Q9H7L2 352 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 PCDHB16Q9NRJ7 776 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 DZANK1Q9NVP4 752 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 SLC22A13Q9Y226 551 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 ANKRD31Q8N7Z5 1873 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 SPTAN1Q13813 2472 aaKnown RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 CDC42EP2O14613 210 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 SRPX2O60687 465 aaPredicted RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 OR8U9P0C7N5 309 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 CSNK1EP49674 416 aaKnown RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 MESP2Q0VG99 397 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 BCL2A1Q16548 175 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 PRAMEF20Q5VT98 475 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 BATF2Q8N1L9 274 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 FAM3DQ96BQ1 224 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 TRMT61AQ96FX7 289 aaKnown RBP12.73□□□□□ -0.37
MUC1-223ENST00000611571 PPA2Q9H2U2 334 aa12.73□□□□□ -0.37
MUC1-223ENST00000611571 TET1Q8NFU7 2136 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 POLEQ07864 2286 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 A0A1B0GTH9 108 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 FAM230AA0A1W2PPH8 454 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 DUX1O43812 170 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 IGHA2P01877 340 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 RAB6AP20340 208 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 SERPINA2P20848 420 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 S100A2P29034 98 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 ALKBH1Q13686 389 aaKnown RBP12.72□□□□□ -0.37
MUC1-223ENST00000611571 EXOSC2Q13868 293 aaKnown RBP12.72□□□□□ -0.37
MUC1-223ENST00000611571 CDKN3Q16667 212 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 MPEG1Q2M385 716 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 C17orf107Q6ZR85 190 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 C17orf47Q8NEP4 570 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 LMF2Q9BU23 707 aaKnown RBP12.72□□□□□ -0.37
MUC1-223ENST00000611571 SLC6A20Q9NP91 592 aa12.72□□□□□ -0.37
MUC1-223ENST00000611571 B3GAT2Q9NPZ5 323 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms