RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 TMEM123Q8N131 208 aa12.55□□□□□ -0.4
HDDC2-206ENST00000608461 GPR137CQ8N3F9 429 aa12.55□□□□□ -0.4
HDDC2-206ENST00000608461 FAM156AQ8NDB6 213 aa12.55□□□□□ -0.4
HDDC2-206ENST00000608461 OR6X1Q8NH79 312 aa12.55□□□□□ -0.4
HDDC2-206ENST00000608461 MCUR1Q96AQ8 359 aa12.55□□□□□ -0.4
HDDC2-206ENST00000608461 BPIFA2Q96DR5 249 aa12.55□□□□□ -0.4
HDDC2-206ENST00000608461 PLPPR2Q96GM1 343 aa12.55□□□□□ -0.4
HDDC2-206ENST00000608461 RADILQ96JH8 1075 aa12.55□□□□□ -0.4
HDDC2-206ENST00000608461 TMEM204Q9BSN7 226 aa12.55□□□□□ -0.4
HDDC2-206ENST00000608461 MAN2C1Q9NTJ4 1040 aa12.55□□□□□ -0.4
HDDC2-206ENST00000608461 NDUFAF4Q9P032 175 aa12.55□□□□□ -0.4
HDDC2-206ENST00000608461 SLC25A15Q9Y619 301 aa12.55□□□□□ -0.4
HDDC2-206ENST00000608461 CSMD2Q7Z408 3487 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 SLC35F4A4IF30 521 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 BLOC1S5-TXNDC5H3BN57 136 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 TMCC2O75069 709 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 UPK3AO75631 287 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 RAF1P04049 648 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 SEMG1P04279 462 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 H1F0P07305 194 aaKnown RBP12.54□□□□□ -0.4
HDDC2-206ENST00000608461 HLA-DOBP13765 273 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 PTNP21246 168 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 DNASE1P24855 282 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 PTAFRP25105 342 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 YAP1P46937 504 aaKnown RBP12.54□□□□□ -0.4
HDDC2-206ENST00000608461 PRPS1P60891 318 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 TRIM25Q14258 630 aaKnown RBP12.54□□□□□ -0.4
HDDC2-206ENST00000608461 TAF11Q15544 211 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 ANKRD16Q6P6B7 361 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 KLHL24Q6TFL4 600 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 SEZ6L2Q6UXD5 910 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 PAMR1Q6UXH9 720 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 C20orf204Q6ZNR8 217 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 MBOAT2Q6ZWT7 520 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 SLC35D2Q76EJ3 337 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 C20orf196Q8IYI0 205 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 LRRC17Q8N6Y2 441 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 PFN4Q8NHR9 129 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 MBD6Q96DN6 1003 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 ZNF347Q96SE7 839 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 KRCC1Q9NPI7 259 aaPredicted RBP12.54□□□□□ -0.4
HDDC2-206ENST00000608461 SLC17A5Q9NRA2 495 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 C20orf141Q9NUB4 165 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 TAS2R1Q9NYW7 299 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 MGAT4BQ9UQ53 548 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 TMEM5Q9Y2B1 443 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 HIF3AQ9Y2N7 669 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 ABCA4P78363 2273 aa12.54□□□□□ -0.4
HDDC2-206ENST00000608461 A0A087WUU8 490 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 A0A1W2PRG6 482 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 C11orf98E9PRG8 122 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 J3KTA2 159 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 ENTPD5O75356 428 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 CD3EP07766 207 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 IFI30P13284 250 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 IFNGR1P15260 489 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 HOXB6P17509 224 aaKnown RBP12.53□□□□□ -0.4
HDDC2-206ENST00000608461 ROR2Q01974 943 aaKnown RBP12.53□□□□□ -0.4
HDDC2-206ENST00000608461 DNAL1Q4LDG9 190 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 TMEM108Q6UXF1 575 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 ZNF730Q6ZMV8 503 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 RINLQ6ZS11 566 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 TMPRSS11FQ6ZWK6 438 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 ZNF627Q7L945 461 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 PIWIL3Q7Z3Z3 882 aaKnown RBP12.53□□□□□ -0.4
HDDC2-206ENST00000608461 TSEN54Q7Z6J9 526 aaKnown RBP12.53□□□□□ -0.4
HDDC2-206ENST00000608461 LSRQ86X29 649 aaPredicted RBP12.53□□□□□ -0.4
HDDC2-206ENST00000608461 FAM169BQ8N8A8 192 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 OR1K1Q8NGR3 316 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 SLC25A44Q96H78 314 aaPredicted RBP12.53□□□□□ -0.4
HDDC2-206ENST00000608461 DHRS1Q96LJ7 313 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 ALKBH3Q96Q83 286 aaPredicted RBP12.53□□□□□ -0.4
HDDC2-206ENST00000608461 PIP5K1AQ99755 562 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 CRLF2Q9HC73 371 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 GPR35Q9HC97 309 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 IL1RAPQ9NPH3 570 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 MED29Q9NX70 200 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 RHCGQ9UBD6 479 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 RNF115Q9Y4L5 304 aa12.53□□□□□ -0.4
HDDC2-206ENST00000608461 ARPC4-TTLL3A0A0A6YYG9 625 aa12.52□□□□□ -0.41
HDDC2-206ENST00000608461 A0A1W2PPR1 153 aa12.52□□□□□ -0.41
HDDC2-206ENST00000608461 ZNF99A8MXY4 864 aaPredicted RBP12.52□□□□□ -0.41
HDDC2-206ENST00000608461 MGRN1O60291 552 aa12.52□□□□□ -0.41
HDDC2-206ENST00000608461 STAMBPO95630 424 aa12.52□□□□□ -0.41
HDDC2-206ENST00000608461 BCL10O95999 233 aa12.52□□□□□ -0.41
HDDC2-206ENST00000608461 FABP3P05413 133 aa12.52□□□□□ -0.41
HDDC2-206ENST00000608461 SAGP10523 405 aaPredicted RBP12.52□□□□□ -0.41
HDDC2-206ENST00000608461 NR2C1P13056 603 aa12.52□□□□□ -0.41
HDDC2-206ENST00000608461 MSX2P35548 267 aaPredicted RBP12.52□□□□□ -0.41
HDDC2-206ENST00000608461 DAP3P51398 398 aaKnown RBP12.52□□□□□ -0.41
HDDC2-206ENST00000608461 FOXG1P55316 489 aaPredicted RBP12.52□□□□□ -0.41
HDDC2-206ENST00000608461 BIDP55957 195 aa12.52□□□□□ -0.41
HDDC2-206ENST00000608461 RPS4XP62701 263 aaKnown RBP12.52□□□□□ -0.41
HDDC2-206ENST00000608461 VLDLRP98155 873 aa12.52□□□□□ -0.41
HDDC2-206ENST00000608461 RPL18Q07020 188 aaKnown RBP12.52□□□□□ -0.41
HDDC2-206ENST00000608461 TRAP1Q12931 704 aaKnown RBP12.52□□□□□ -0.41
HDDC2-206ENST00000608461 KEAP1Q14145 624 aa12.52□□□□□ -0.41
HDDC2-206ENST00000608461 ACKR1Q16570 336 aa12.52□□□□□ -0.41
HDDC2-206ENST00000608461 C3orf36Q3SXR2 165 aa12.52□□□□□ -0.41
HDDC2-206ENST00000608461 IQCCQ4KMZ1 466 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms