RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CDH12P55289 794 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 IL1RL1Q01638 556 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 PMS2P3Q13401 168 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 GGTLC2Q14390 218 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 RUNDC3AQ59EK9 446 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 CARD17Q5XLA6 110 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 LINC00114Q6XXX2 140 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 ARMC8Q8IUR7 673 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 WDFY1Q8IWB7 410 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 UEVLDQ8IX04 471 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 C20orf196Q8IYI0 205 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 ZCCHC24Q8N2G6 241 aaKnown RBP6.6□□□□□ -1.35
CUX1-219ENST00000606749 SCAIQ8N9R8 606 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 HIPK4Q8NE63 616 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 IL17RDQ8NFM7 739 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 RNF217Q8TC41 542 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 TMEM158Q8WZ71 300 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 LRR1Q96L50 414 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 ATP6V1G3Q96LB4 118 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 MOGAT1Q96PD6 335 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 EPYCQ99645 322 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 CPPED1Q9BRF8 314 aaPredicted RBP6.6□□□□□ -1.35
CUX1-219ENST00000606749 PIMREGQ9BSJ6 248 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 EMC6Q9BV81 110 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 ASPNQ9BXN1 380 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 RAB1BQ9H0U4 201 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 ZNF442Q9H7R0 627 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 EVA1AQ9H8M9 152 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 MYOZ1Q9NP98 299 aaPredicted RBP6.6□□□□□ -1.35
CUX1-219ENST00000606749 B3GNT2Q9NY97 397 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 MRPL39Q9NYK5 338 aaKnown RBP6.6□□□□□ -1.35
CUX1-219ENST00000606749 SELENONQ9NZV5 590 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.6□□□□□ -1.35
CUX1-219ENST00000606749 TESQ9UGI8 421 aaKnown RBP6.6□□□□□ -1.35
CUX1-219ENST00000606749 FBXO9Q9UK97 447 aaPredicted RBP6.6□□□□□ -1.35
CUX1-219ENST00000606749 CORO2BQ9UQ03 480 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 CORINQ9Y5Q5 1042 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 DNHD1Q96M86 4753 aa6.6□□□□□ -1.35
CUX1-219ENST00000606749 ANK3Q12955 4377 aaKnown RBP6.6□□□□□ -1.35
CUX1-219ENST00000606749 IGHV4-61A0A0C4DH41 118 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 LOC100289279A0A1B0GTE1 492 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 SH3PXD2BA1X283 911 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 hCG_2039718K7EN88 272 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 M0QX08 132 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 PLPP3O14495 311 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 PHF1O43189 567 aaPredicted RBP6.59□□□□□ -1.35
CUX1-219ENST00000606749 AKAP8O43823 692 aaKnown RBP6.59□□□□□ -1.35
CUX1-219ENST00000606749 SEC14L2O76054 403 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 STAMBPO95630 424 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 HLA-HP01893 362 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 C8BP07358 591 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 IGFBP1P08833 259 aaPredicted RBP6.59□□□□□ -1.35
CUX1-219ENST00000606749 CD79AP11912 226 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 APEHP13798 732 aaKnown RBP6.59□□□□□ -1.35
CUX1-219ENST00000606749 NPR2P20594 1047 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 NR4A1P22736 598 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 AHCYP23526 432 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 GIFP27352 417 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 CAPZA2P47755 286 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 RGS8P57771 180 aaPredicted RBP6.59□□□□□ -1.35
CUX1-219ENST00000606749 NCALDP61601 193 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 PIGFQ07326 219 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 PUDPQ08623 228 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 NPRL3Q12980 569 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 SQLEQ14534 574 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 CARTPTQ16568 116 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 DUSP7Q16829 419 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 IQCCQ4KMZ1 466 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 ZNF613Q6PF04 617 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 ZNF627Q7L945 461 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 SPATA21Q7Z572 469 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 PXKQ7Z7A4 578 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 MDP1Q86V88 176 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 PTOV1Q86YD1 416 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 PHC2Q8IXK0 858 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 SVOPLQ8N434 492 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 C10orf53Q8N6V4 93 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 ARIH2OSQ8N7S6 290 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 SMYD1Q8NB12 490 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 ZNF540Q8NDQ6 660 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 NEU4Q8WWR8 484 aaPredicted RBP6.59□□□□□ -1.35
CUX1-219ENST00000606749 MSI2Q96DH6 328 aaKnown RBP6.59□□□□□ -1.35
CUX1-219ENST00000606749 ZNF75AQ96N20 296 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 ANKRD27Q96NW4 1050 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 MCHR1Q99705 422 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 TMEM43Q9BTV4 400 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 BPESC1Q9GZL8 116 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 SHARPINQ9H0F6 387 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 RABEP2Q9H5N1 569 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 MED29Q9NX70 200 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 LPAR3Q9UBY5 353 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 SLC13A4Q9UKG4 626 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 USP22Q9UPT9 525 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 ANGPT4Q9Y264 503 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 NOX1Q9Y5S8 564 aa6.59□□□□□ -1.35
CUX1-219ENST00000606749 ZNF726A6NNF4 738 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 LRRN3E7EW58 273 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 M0R3H8 397 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 FMO6PO60774 539 aa6.58□□□□□ -1.36
CUX1-219ENST00000606749 LYPD3O95274 346 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms