RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 NANOGNBQ7Z5D8 188 aa16.86■□□□□ 0.29
SRSF4-206ENST00000605204 CYP4Z1Q86W10 505 aa16.86■□□□□ 0.29
SRSF4-206ENST00000605204 TMEM123Q8N131 208 aa16.86■□□□□ 0.29
SRSF4-206ENST00000605204 LRRC75A-AS1Q8N1F1 130 aa16.86■□□□□ 0.29
SRSF4-206ENST00000605204 LIPHQ8WWY8 451 aa16.86■□□□□ 0.29
SRSF4-206ENST00000605204 MAGEL2Q9UJ55 1249 aa16.86■□□□□ 0.29
SRSF4-206ENST00000605204 ZNF726A6NNF4 738 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 KPNA4O00629 521 aaPredicted RBP16.85■□□□□ 0.29
SRSF4-206ENST00000605204 CLOCKO15516 846 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 SHOX2O60902 331 aaPredicted RBP16.85■□□□□ 0.29
SRSF4-206ENST00000605204 UMPSP11172 480 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 HSD17B1P14061 328 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 FXNQ16595 210 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 VTCN1Q7Z7D3 282 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 LSRQ86X29 649 aaPredicted RBP16.85■□□□□ 0.29
SRSF4-206ENST00000605204 CCDC36Q8IYA8 594 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 DEPDC4Q8N2C3 294 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 CCDC197Q8NCU1 140 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 OR1K1Q8NGR3 316 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 AKAP1Q92667 903 aaKnown RBP eCLIP16.85■□□□□ 0.29
SRSF4-206ENST00000605204 FBXW5Q969U6 566 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 HSH2DQ96JZ2 352 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 ANKRD19PQ9H560 264 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 CXorf56Q9H5V9 222 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 GORASP2Q9H8Y8 452 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 MEPEQ9NQ76 525 aaPredicted RBP16.85■□□□□ 0.29
SRSF4-206ENST00000605204 FAIMQ9NVQ4 179 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 A4GNTQ9UNA3 340 aa16.85■□□□□ 0.29
SRSF4-206ENST00000605204 ARPC4-TTLL3A0A0A6YYG9 625 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 DPRXA6NFQ7 191 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 LRRN3E7EW58 273 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 ENTPD5O75356 428 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 UPK3AO75631 287 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 HPRP00739 348 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 PTNP21246 168 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 FOXG1P55316 489 aaPredicted RBP16.84■□□□□ 0.29
SRSF4-206ENST00000605204 UBE2NP61088 152 aaKnown RBP16.84■□□□□ 0.29
SRSF4-206ENST00000605204 TRAM2Q15035 370 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 C3orf36Q3SXR2 165 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 ZNF672Q499Z4 452 aaPredicted RBP16.84■□□□□ 0.29
SRSF4-206ENST00000605204 C9orf135Q5VTT2 229 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 NKAIN4Q8IVV8 208 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 C20orf196Q8IYI0 205 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 FAM169BQ8N8A8 192 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 WDR31Q8NA23 367 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 OR6X1Q8NH79 312 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 TMEM255BQ8WV15 326 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 TMEM171Q8WVE6 324 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 SGTBQ96EQ0 304 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 FNDC11Q9BVV2 318 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 NPAP1Q9NZP6 1156 aa16.84■□□□□ 0.29
SRSF4-206ENST00000605204 STX18Q9P2W9 335 aaKnown RBP16.84■□□□□ 0.29
SRSF4-206ENST00000605204 RNF13O43567 381 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 SMPD2O60906 423 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 OR7A10O76100 309 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 CD99P14209 185 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 CDH2P19022 906 aaPredicted RBP16.83■□□□□ 0.28
SRSF4-206ENST00000605204 CD40P25942 277 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 UGT2B15P54855 530 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 TBRG1Q3YBR2 411 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 ANKDD1AQ495B1 522 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 SHEQ5VZ18 495 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 GLYATQ6IB77 296 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 NHLRC1Q6VVB1 395 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 SLC46A3Q7Z3Q1 461 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 TGIF2LYQ8IUE0 185 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 RNF113BQ8IZP6 322 aaKnown RBP16.83■□□□□ 0.28
SRSF4-206ENST00000605204 CRLF2Q9HC73 371 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 GPR35Q9HC97 309 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 DCAF13Q9NV06 445 aaKnown RBP16.83■□□□□ 0.28
SRSF4-206ENST00000605204 ARL8BQ9NVJ2 186 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 TAS2R5Q9NYW4 299 aa16.83■□□□□ 0.28
SRSF4-206ENST00000605204 GMPR2Q9P2T1 348 aaKnown RBP16.83■□□□□ 0.28
SRSF4-206ENST00000605204 FREM1Q5H8C1 2179 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 SLC35F4A4IF30 521 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 NPIPB13A6NJU9 1138 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 ZNF99A8MXY4 864 aaPredicted RBP16.82■□□□□ 0.28
SRSF4-206ENST00000605204 CENPBD1B2RD01 187 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 NPIPB4C9JG80 1138 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 ABCD4O14678 606 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 ARHGEF9O43307 516 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 PLAUP00749 431 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 HLA-DOBP13765 273 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 ZNF83P51522 516 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 MXRA7P84157 204 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 FOXD4Q12950 439 aaPredicted RBP16.82■□□□□ 0.28
SRSF4-206ENST00000605204 SLC35D2Q76EJ3 337 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 ARHGAP24Q8N264 748 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 OR6N1Q8NGY5 312 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 BCL2L2Q92843 193 aaPredicted RBP16.82■□□□□ 0.28
SRSF4-206ENST00000605204 MED29Q9NX70 200 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 FAM53CQ9NYF3 392 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 EGFL7Q9UHF1 273 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 FAM32AQ9Y421 112 aaKnown RBP16.82■□□□□ 0.28
SRSF4-206ENST00000605204 ENPP4Q9Y6X5 453 aa16.82■□□□□ 0.28
SRSF4-206ENST00000605204 A0A1W2PRG6 482 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 IFNGR1P15260 489 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 PAX1P15863 534 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 ITGA2P17301 1181 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 FUT1P19526 365 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms