RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 POLR2J2Q9GZM3 115 aaKnown RBP12.63□□□□□ -0.39
TUBE1-208ENST00000604743 POLR2J3Q9H1A7 115 aaKnown RBP12.63□□□□□ -0.39
TUBE1-208ENST00000604743 FKRPQ9H9S5 495 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 GPR35Q9HC97 309 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 SPAG4Q9NPE6 437 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 MEPEQ9NQ76 525 aaPredicted RBP12.63□□□□□ -0.39
TUBE1-208ENST00000604743 ABCD2Q9UBJ2 740 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 LAMP3Q9UQV4 416 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 NOX1Q9Y5S8 564 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 SNX13Q9Y5W8 968 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 PLCE1Q9P212 2302 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 VPS13CQ709C8 3753 aa12.63□□□□□ -0.39
TUBE1-208ENST00000604743 BLOC1S5-TXNDC5H3BN57 136 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 J3KTA2 159 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 RNF13O43567 381 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 PIP5K1CO60331 668 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 MT-ND1P03886 318 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 IFNW1P05000 195 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 FUT1P19526 365 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 TCN1P20061 433 aaPredicted RBP12.62□□□□□ -0.39
TUBE1-208ENST00000604743 CD40P25942 277 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 IFNA8P32881 189 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 CDH11P55287 796 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 BIDP55957 195 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 ADAM8P78325 824 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 ARF1P84077 181 aaKnown RBP12.62□□□□□ -0.39
TUBE1-208ENST00000604743 MXRA7P84157 204 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 SPOCK1Q08629 439 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 CEACAM16Q2WEN9 425 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 ZNF672Q499Z4 452 aaPredicted RBP12.62□□□□□ -0.39
TUBE1-208ENST00000604743 IFI44LQ53G44 452 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 PHYHD1Q5SRE7 291 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 SLC22A25Q6T423 547 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 NANOGNBQ7Z5D8 188 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 PXKQ7Z7A4 578 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 WDFY1Q8IWB7 410 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 RBM15BQ8NDT2 890 aaKnown RBP12.62□□□□□ -0.39
TUBE1-208ENST00000604743 OR6N1Q8NGY5 312 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 BCL2L2Q92843 193 aaPredicted RBP12.62□□□□□ -0.39
TUBE1-208ENST00000604743 ZNF837Q96EG3 531 aaPredicted RBP12.62□□□□□ -0.39
TUBE1-208ENST00000604743 CCT8L2Q96SF2 557 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 ZNF426Q9BUY5 554 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 CRLF2Q9HC73 371 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 C20orf141Q9NUB4 165 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 TAS2R5Q9NYW4 299 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 CISD1Q9NZ45 108 aaKnown RBP12.62□□□□□ -0.39
TUBE1-208ENST00000604743 TAGLN3Q9UI15 199 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 ZNF229Q9UJW7 825 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 POU2F3Q9UKI9 436 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 A4GNTQ9UNA3 340 aa12.62□□□□□ -0.39
TUBE1-208ENST00000604743 SHISA9B4DS77 424 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 GMNNO75496 209 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 SEC14L2O76054 403 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 IFNGR1P15260 489 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 PTAFRP25105 342 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 RBM34P42696 430 aaKnown RBP12.61□□□□□ -0.39
TUBE1-208ENST00000604743 UBE2NP61088 152 aaKnown RBP12.61□□□□□ -0.39
TUBE1-208ENST00000604743 ST3GAL3Q11203 375 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 MELKQ14680 651 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 GLYATQ6IB77 296 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 SLC35D2Q76EJ3 337 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 SLC46A3Q7Z3Q1 461 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 TGIF2LYQ8IUE0 185 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 TMEM123Q8N131 208 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 FAM156AQ8NDB6 213 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 WFDC11Q8NEX6 87 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 SMAP2Q8WU79 429 aaPredicted RBP12.61□□□□□ -0.39
TUBE1-208ENST00000604743 GEMIN6Q8WXD5 167 aaKnown RBP12.61□□□□□ -0.39
TUBE1-208ENST00000604743 SGTBQ96EQ0 304 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 RADILQ96JH8 1075 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 PRRC1Q96M27 445 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 HS6ST2Q96MM7 605 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 PIP5K1AQ99755 562 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 FNDC11Q9BVV2 318 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 MED31Q9Y3C7 131 aa12.61□□□□□ -0.39
TUBE1-208ENST00000604743 MAGED1Q9Y5V3 778 aaPredicted RBP12.61□□□□□ -0.39
TUBE1-208ENST00000604743 RPL36A-HNRNPH2H7BZ11 118 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 OR7A10O76100 309 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 ASAH2BP0C7U1 165 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 THRBP10828 461 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 CD99P14209 185 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 FUT4P22083 530 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 CAPZA2P47755 286 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 ZP4Q12836 540 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 Q5PR19 223 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 ANKRD16Q6P6B7 361 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 NHLRC1Q6VVB1 395 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 C20orf196Q8IYI0 205 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 DEPDC4Q8N2C3 294 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 ANKK1Q8NFD2 765 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 CDRT15Q96T59 188 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 CXorf56Q9H5V9 222 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 B3GAT2Q9NPZ5 323 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 RPS6KA6Q9UK32 745 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 MGAT4BQ9UQ53 548 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 ATP23Q9Y6H3 246 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 V9GYQ6 96 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 ACANP16112 2415 aa12.6□□□□□ -0.39
TUBE1-208ENST00000604743 ARHGEF9O43307 516 aa12.59□□□□□ -0.39
TUBE1-208ENST00000604743 F13BP05160 661 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms