RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 PIK3C3Q8NEB9 887 aa15.54■□□□□ 0.08
CHMP2A-208ENST00000601220 OR6S1Q8NH40 331 aa15.54■□□□□ 0.08
CHMP2A-208ENST00000601220 NFKBIDQ8NI38 313 aa15.54■□□□□ 0.08
CHMP2A-208ENST00000601220 DNAJA4Q8WW22 397 aaPredicted RBP15.54■□□□□ 0.08
CHMP2A-208ENST00000601220 C1orf159Q96HA4 380 aa15.54■□□□□ 0.08
CHMP2A-208ENST00000601220 RPS6KB2Q9UBS0 482 aa15.54■□□□□ 0.08
CHMP2A-208ENST00000601220 USH1CQ9Y6N9 552 aa15.54■□□□□ 0.08
CHMP2A-208ENST00000601220 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 A0A087WUJ7 227 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 SEC14L2O76054 403 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 BGLAPP02818 100 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 CBLP22681 906 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 NR4A1P22736 598 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 GTF2E2P29084 291 aaKnown RBP15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 POU3F1Q03052 451 aaPredicted RBP15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 CR1LQ2VPA4 569 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 ALG10BQ5I7T1 473 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 PAGE3Q5JUK9 113 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 FAM91A1Q658Y4 838 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 ULK3Q6PHR2 472 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 GOLGA6L1Q8N7Z2 621 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 IL17RDQ8NFM7 739 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 TXNDC15Q96J42 360 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 LRR1Q96L50 414 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 ANKRD27Q96NW4 1050 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 IKZF5Q9H5V7 419 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 ZNF224Q9NZL3 707 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 USP22Q9UPT9 525 aa15.53■□□□□ 0.08
CHMP2A-208ENST00000601220 A0A0B4J2E0 115 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 A0A1B0GX12 115 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 C5orf58C9J3I9 102 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 M0R3G1 203 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 HLA-HP01893 362 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 ZNF35P13682 527 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 ZNF14P17017 642 aaPredicted RBP15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 CDK6Q00534 326 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 NPRL3Q12980 569 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 DAG1Q14118 895 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 ADRM1Q16186 407 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 GCNT6Q5T4J0 391 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 REEP3Q6NUK4 255 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 CKAP2Q8WWK9 683 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 HPS1Q92902 700 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 MS4A3Q96HJ5 214 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 EMC6Q9BV81 110 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 TMBIM4Q9HC24 238 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 NKIRAS1Q9NYS0 192 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 VAPAQ9P0L0 249 aa15.52■□□□□ 0.08
CHMP2A-208ENST00000601220 SH3PXD2BA1X283 911 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 VSTM5A8MXK1 200 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 ADRA2AP08913 450 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 EVX1P49640 407 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 CHN2P52757 468 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 SNTB2Q13425 540 aaKnown RBP15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 MFSD13AQ14CX5 517 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 OR1Q1Q15612 314 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 TRIP10Q15642 601 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 CARD17Q5XLA6 110 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 KRT80Q6KB66 452 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 UEVLDQ8IX04 471 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 SCAIQ8N9R8 606 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 UBASH3BQ8TF42 649 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 SLC47A1Q96FL8 570 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 MOGAT1Q96PD6 335 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 MRPL37Q9BZE1 423 aaKnown RBP15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 TMEM38AQ9H6F2 299 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 MED29Q9NX70 200 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 MRPL39Q9NYK5 338 aaKnown RBP15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 CORINQ9Y5Q5 1042 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 NBEAL1Q6ZS30 2694 aa15.51■□□□□ 0.07
CHMP2A-208ENST00000601220 LRRN3E7EW58 273 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 LYNX1G3V0Z9 82 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 AKAP8O43823 692 aaKnown RBP15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 LYNX1P0DP58 116 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 GPX2P18283 190 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 HNF1AP20823 631 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 IDH3AP50213 366 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 AQP5P55064 265 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 CDH12P55289 794 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 SQLEQ14534 574 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 LINC00114Q6XXX2 140 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 MRPL24Q96A35 216 aaKnown RBP15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 SPDL1Q96EA4 605 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 C7orf26Q96N11 449 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 EBF4Q9BQW3 602 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 SPATA5L1Q9BVQ7 753 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 TCF7L2Q9NQB0 619 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 TESQ9UGI8 421 aaKnown RBP15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 CMAHPQ9Y471 501 aa15.5■□□□□ 0.07
CHMP2A-208ENST00000601220 PLPP3O14495 311 aa15.49■□□□□ 0.07
CHMP2A-208ENST00000601220 ZNF500O60304 480 aaPredicted RBP15.49■□□□□ 0.07
CHMP2A-208ENST00000601220 TGDSO95455 350 aa15.49■□□□□ 0.07
CHMP2A-208ENST00000601220 CAPZA2P47755 286 aa15.49■□□□□ 0.07
CHMP2A-208ENST00000601220 IL1RL1Q01638 556 aa15.49■□□□□ 0.07
CHMP2A-208ENST00000601220 FXNQ16595 210 aa15.49■□□□□ 0.07
CHMP2A-208ENST00000601220 GSG1Q2KHT4 349 aa15.49■□□□□ 0.07
CHMP2A-208ENST00000601220 LINC01356Q8N9X3 169 aa15.49■□□□□ 0.07
CHMP2A-208ENST00000601220 SNX18Q96RF0 628 aa15.49■□□□□ 0.07
CHMP2A-208ENST00000601220 TMEM27Q9HBJ8 222 aa15.49■□□□□ 0.07
CHMP2A-208ENST00000601220 NOX1Q9Y5S8 564 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms