RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	ZNF837	Q96EG3	531 aa	Predicted RBP	13.53	□□□□□ -0.24
PLD3-223	ENST00000600948	TXNDC15	Q96J42	360 aa		13.53	□□□□□ -0.24
PLD3-223	ENST00000600948	HOPX	Q9BPY8	73 aa	Predicted RBP	13.53	□□□□□ -0.24
PLD3-223	ENST00000600948	EMC6	Q9BV81	110 aa		13.53	□□□□□ -0.24
PLD3-223	ENST00000600948	NSRP1	Q9H0G5	558 aa	Known RBP	13.53	□□□□□ -0.24
PLD3-223	ENST00000600948	EFCAB1	Q9HAE3	211 aa		13.53	□□□□□ -0.24
PLD3-223	ENST00000600948	MEPE	Q9NQ76	525 aa	Predicted RBP	13.53	□□□□□ -0.24
PLD3-223	ENST00000600948	MED29	Q9NX70	200 aa		13.53	□□□□□ -0.24
PLD3-223	ENST00000600948	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	SLC35F4	A4IF30	521 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	GMNC	A6NCL1	334 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948		E7EQL1	145 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	CD8A	P01732	235 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	ADORA3	P0DMS8	318 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	GSK3B	P49841	420 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	NUDT2	P50583	147 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	GYS2	P54840	703 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	TAS2R41	P59536	307 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	SELENOW	P63302	87 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	ARF1	P84077	181 aa	Known RBP	13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	PIN1	Q13526	163 aa	Predicted RBP	13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	CEACAM16	Q2WEN9	425 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	CARD17	Q5XLA6	110 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	ANKRD16	Q6P6B7	361 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	SLC22A25	Q6T423	547 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	C20orf196	Q8IYI0	205 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	LRRC17	Q8N6Y2	441 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948		Q96MF0	132 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	GRIP2	Q9C0E4	1043 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	CRLF2	Q9HC73	371 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	NANS	Q9NR45	359 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	TAS2R5	Q9NYW4	299 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	RIMS3	Q9UJD0	308 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	ZNF229	Q9UJW7	825 aa		13.52	□□□□□ -0.25
PLD3-223	ENST00000600948	ARFGEF3	Q5TH69	2177 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948		A0A096LPE4	126 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948		A0A1W2PPZ6	126 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	C11orf98	E9PRG8	122 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	CXCR6	O00574	342 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	SERPINI2	O75830	405 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	ASAH2B	P0C7U1	165 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	HOXB1	P14653	301 aa	Predicted RBP	13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	AHCY	P23526	432 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	PRDX6	P30041	224 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	RBM34	P42696	430 aa	Known RBP	13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	UGT2B15	P54855	530 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	ATP5J2	P56134	94 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	UBE2N	P61088	152 aa	Known RBP	13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	TUBA1B	P68363	451 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	TUBA4A	P68366	448 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	ZP4	Q12836	540 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	TUBA1A	Q71U36	451 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	CPLX4	Q7Z7G2	160 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	PFN4	Q8NHR9	129 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	TMEM255B	Q8WV15	326 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	CMTM5	Q96DZ9	223 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	TPD52L3	Q96J77	140 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	C18orf12	Q96KH6	178 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	LRR1	Q96L50	414 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	DHRS9	Q9BPW9	319 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	ALG2	Q9H553	416 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	FAIM	Q9NVQ4	179 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	ABCD2	Q9UBJ2	740 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	POU2F3	Q9UKI9	436 aa		13.51	□□□□□ -0.25
PLD3-223	ENST00000600948	IGHV1-18	A0A0C4DH31	117 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	ATP6V1G2-DDX39B	F2Z307	99 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948		M0R3G1	203 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	OR6A2	O95222	327 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	IGF2	P01344	180 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	MT-ND1	P03886	318 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	THRB	P10828	461 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	PAX7	P23759	505 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	CDKN1A	P38936	164 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	BID	P55957	195 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	PSME3	P61289	254 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	GNGT1	P63211	74 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	CAMK2D	Q13557	499 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	C11orf71	Q6IPW1	123 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	VTCN1	Q7Z7D3	282 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	DEPDC4	Q8N2C3	294 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	TMEM239	Q8WW34	195 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	LZIC	Q8WZA0	190 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	GTPBP3	Q969Y2	492 aa	Known RBP	13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	PRRC1	Q96M27	445 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	SLC38A2	Q96QD8	506 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	GSX1	Q9H4S2	264 aa	Predicted RBP	13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	CRNN	Q9UBG3	495 aa	Predicted RBP	13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	A4GNT	Q9UNA3	340 aa		13.5	□□□□□ -0.25
PLD3-223	ENST00000600948	ZNF726	A6NNF4	738 aa		13.49	□□□□□ -0.25
PLD3-223	ENST00000600948	ZNF99	A8MXY4	864 aa	Predicted RBP	13.49	□□□□□ -0.25
PLD3-223	ENST00000600948	NDUFAB1	O14561	156 aa		13.49	□□□□□ -0.25
PLD3-223	ENST00000600948	RNF13	O43567	381 aa		13.49	□□□□□ -0.25
PLD3-223	ENST00000600948	SEC14L2	O76054	403 aa		13.49	□□□□□ -0.25
PLD3-223	ENST00000600948	IGLV1-44	P01699	117 aa		13.49	□□□□□ -0.25
PLD3-223	ENST00000600948	HIST1H2AB	P04908	130 aa		13.49	□□□□□ -0.25
PLD3-223	ENST00000600948	UMPS	P11172	480 aa		13.49	□□□□□ -0.25
PLD3-223	ENST00000600948	IFNGR1	P15260	489 aa		13.49	□□□□□ -0.25
PLD3-223	ENST00000600948	TTK	P33981	857 aa		13.49	□□□□□ -0.25
PLD3-223	ENST00000600948	RIPPLY3	P57055	190 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms