RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-223ENST00000600872 MFSD13AQ14CX5 517 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 CEACAM16Q2WEN9 425 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 REP15Q6BDI9 236 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 PATL1Q86TB9 770 aaKnown RBP11.1□□□□□ -0.63
FKRP-223ENST00000600872 RANBP3LQ86VV4 465 aaPredicted RBP11.1□□□□□ -0.63
FKRP-223ENST00000600872 PRIMA1Q86XR5 153 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 SLC30A8Q8IWU4 369 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 FBXL14Q8N1E6 418 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 OR8J3Q8NGG0 315 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 C10orf82Q8WW14 230 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 HTRA1Q92743 480 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 LRR1Q96L50 414 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 EPYCQ99645 322 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 KATNB1Q9BVA0 655 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 ALG2Q9H553 416 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 CRLF2Q9HC73 371 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 MEPEQ9NQ76 525 aaPredicted RBP11.1□□□□□ -0.63
FKRP-223ENST00000600872 B3GNT2Q9NY97 397 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 TAS2R5Q9NYW4 299 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 ZNF224Q9NZL3 707 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 POU2F3Q9UKI9 436 aa11.1□□□□□ -0.63
FKRP-223ENST00000600872 MALRD1Q5VYJ5 2156 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 SLC35F4A4IF30 521 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 CPSF4LA6NMK7 179 aaKnown RBP11.09□□□□□ -0.63
FKRP-223ENST00000600872 INAFM1C9JVW0 142 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 KRT33AO76009 404 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 MT-ATP6P00846 226 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 NPPAP01160 153 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 ASAH2BP0C7U1 165 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 CBR1P16152 277 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 GTF2E2P29084 291 aaKnown RBP11.09□□□□□ -0.63
FKRP-223ENST00000600872 APOBEC3AP31941 199 aaPredicted RBP11.09□□□□□ -0.63
FKRP-223ENST00000600872 ARFIP2P53365 341 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 GUCY1A3Q02108 690 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 HGFACQ04756 655 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 C1DQ13901 141 aaKnown RBP11.09□□□□□ -0.63
FKRP-223ENST00000600872 CYLC2Q14093 348 aaPredicted RBP11.09□□□□□ -0.63
FKRP-223ENST00000600872 ZNF74Q16587 644 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 HMBOX1Q6NT76 420 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 SLC46A3Q7Z3Q1 461 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 PXKQ7Z7A4 578 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 UEVLDQ8IX04 471 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 LRRC17Q8N6Y2 441 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 PIK3C3Q8NEB9 887 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 OR5J2Q8NH18 312 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 VANGL1Q8TAA9 524 aaPredicted RBP11.09□□□□□ -0.63
FKRP-223ENST00000600872 FKRPQ9H9S5 495 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 NOX3Q9HBY0 568 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 GMPR2Q9P2T1 348 aaKnown RBP11.09□□□□□ -0.63
FKRP-223ENST00000600872 ATP23Q9Y6H3 246 aa11.09□□□□□ -0.63
FKRP-223ENST00000600872 TRAPPC13A5PLN9 417 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 ZNF99A8MXY4 864 aaPredicted RBP11.08□□□□□ -0.64
FKRP-223ENST00000600872 MRASO14807 208 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 SSX4O60224 188 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 SEC14L2O76054 403 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 IGFBP1P08833 259 aaPredicted RBP11.08□□□□□ -0.64
FKRP-223ENST00000600872 TROVE2P10155 538 aaKnown RBP eCLIP11.08□□□□□ -0.64
FKRP-223ENST00000600872 TNFRSF1BP20333 461 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 FUT4P22083 530 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 PAX7P23759 505 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 POU3F1Q03052 451 aaPredicted RBP11.08□□□□□ -0.64
FKRP-223ENST00000600872 ZP4Q12836 540 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 PMS2P3Q13401 168 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 ADIPOQQ15848 244 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 INTS11Q5TA45 600 aaKnown RBP11.08□□□□□ -0.64
FKRP-223ENST00000600872 KLHL24Q6TFL4 600 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 SNX32Q86XE0 403 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 DEPDC4Q8N2C3 294 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 GPR137CQ8N3F9 429 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 NANOS1Q8WY41 292 aaKnown RBP11.08□□□□□ -0.64
FKRP-223ENST00000600872 ASPNQ9BXN1 380 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 BARX1Q9HBU1 254 aaPredicted RBP11.08□□□□□ -0.64
FKRP-223ENST00000600872 SLC13A4Q9UKG4 626 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 ADAM21Q9UKJ8 722 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 SLC7A7Q9UM01 511 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 NOX1Q9Y5S8 564 aa11.08□□□□□ -0.64
FKRP-223ENST00000600872 FBN1P35555 2871 aaKnown RBP11.07□□□□□ -0.64
FKRP-223ENST00000600872 IGHV2OR16-5A0A0B4J2B6 119 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 LOC100653049A0A140TA62 436 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 TMEM129A0AVI4 362 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 BBIP1A8MTZ0 92 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 M0R3G1 203 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 KRT34O76011 436 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 LY6HO94772 140 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 CH25HO95992 272 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 TSPAN19P0C672 248 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 NQO1P15559 274 aaKnown RBP11.07□□□□□ -0.64
FKRP-223ENST00000600872 PCSK6P29122 969 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 UBE2NP61088 152 aaKnown RBP11.07□□□□□ -0.64
FKRP-223ENST00000600872 CAMK2DQ13557 499 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 MSMPQ1L6U9 139 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 CARD17Q5XLA6 110 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 C8orf82Q6P1X6 216 aaPredicted RBP11.07□□□□□ -0.64
FKRP-223ENST00000600872 MDP1Q86V88 176 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 CARM1Q86X55 608 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 NKAIN4Q8IVV8 208 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 ZNF525Q8N782 197 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 RNF217Q8TC41 542 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 TMEM54Q969K7 222 aa11.07□□□□□ -0.64
FKRP-223ENST00000600872 MPP4Q96JB8 637 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms