RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SFXN3Q9BWM7 321 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 SIGLEC7Q9Y286 467 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 MAGED1Q9Y5V3 778 aaPredicted RBP16.72■□□□□ 0.27
CCDC9-205ENST00000600117 TRAV27A0A087WT01 109 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 UNC119BA6NIH7 251 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 BLOC1S5-TXNDC5H3BN57 136 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 C19orf84I3L1E1 186 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 GPR171O14626 319 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 TRAF3IP2O43734 574 aaPredicted RBP16.71■□□□□ 0.27
CCDC9-205ENST00000600117 PTP4A3O75365 173 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 CGAP01215 116 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 ZNF26P17031 533 aaPredicted RBP16.71■□□□□ 0.27
CCDC9-205ENST00000600117 CHRNB4P30926 498 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 SMSP52788 366 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 FXYD6P3P58550 94 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 TSPAN31Q12999 210 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 CDSNQ15517 529 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 ZBED5Q49AG3 693 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 TMEM201Q5SNT2 666 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 CREB3L2Q70SY1 520 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 BTLAQ7Z6A9 289 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 OAFQ86UD1 273 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 CNEP1R1Q8N9A8 125 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 LRRC75AQ8NAA5 344 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 RELL2Q8NC24 303 aaPredicted RBP16.71■□□□□ 0.27
CCDC9-205ENST00000600117 OR51A7Q8NH64 312 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 SDCCAG3Q96C92 435 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 STARD4Q96DR4 205 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 NRBF2Q96F24 287 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 CENPNQ96H22 339 aaPredicted RBP16.71■□□□□ 0.27
CCDC9-205ENST00000600117 ZNF385AQ96PM9 386 aaKnown RBP16.71■□□□□ 0.27
CCDC9-205ENST00000600117 DGCR6LQ9BY27 220 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 MCCC2Q9HCC0 563 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 EMC3Q9P0I2 261 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 PDP1Q9P0J1 537 aaPredicted RBP16.71■□□□□ 0.27
CCDC9-205ENST00000600117 ZNF629Q9UEG4 869 aaPredicted RBP16.71■□□□□ 0.27
CCDC9-205ENST00000600117 EMC9Q9Y3B6 208 aa16.71■□□□□ 0.27
CCDC9-205ENST00000600117 C11orf98E9PRG8 122 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 HOXB4P17483 251 aaPredicted RBP16.7■□□□□ 0.26
CCDC9-205ENST00000600117 PRKACGP22612 351 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 EDNRAP25101 427 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 OPRM1P35372 400 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 TLE4Q04727 773 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 ANKDD1AQ495B1 522 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 EEF1A1P5Q5VTE0 462 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 ANKRD34AQ69YU3 496 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 PXKQ7Z7A4 578 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 OR6K3Q8NGY3 331 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 ASB5Q8WWX0 329 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 STMN2Q93045 179 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 TMEM45BQ96B21 275 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 FEVQ99581 238 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 SPOCK3Q9BQ16 436 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 SEMA6AQ9H2E6 1030 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 MGAT4BQ9UQ53 548 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 NOX1Q9Y5S8 564 aa16.7■□□□□ 0.26
CCDC9-205ENST00000600117 OR6A2O95222 327 aa16.69■□□□□ 0.26
CCDC9-205ENST00000600117 CLDN14O95500 239 aa16.69■□□□□ 0.26
CCDC9-205ENST00000600117 ZNF43P17038 809 aa16.69■□□□□ 0.26
CCDC9-205ENST00000600117 IL1RL1Q01638 556 aa16.69■□□□□ 0.26
CCDC9-205ENST00000600117 POU3F1Q03052 451 aaPredicted RBP16.69■□□□□ 0.26
CCDC9-205ENST00000600117 GALNT5Q7Z7M9 940 aa16.69■□□□□ 0.26
CCDC9-205ENST00000600117 UEVLDQ8IX04 471 aa16.69■□□□□ 0.26
CCDC9-205ENST00000600117 PQLC1Q8N2U9 271 aa16.69■□□□□ 0.26
CCDC9-205ENST00000600117 ANKK1Q8NFD2 765 aa16.69■□□□□ 0.26
CCDC9-205ENST00000600117 LILRB4Q8NHJ6 448 aa16.69■□□□□ 0.26
CCDC9-205ENST00000600117 NIPSNAP1Q9BPW8 284 aa16.69■□□□□ 0.26
CCDC9-205ENST00000600117 ENKD1Q9H0I2 346 aa16.69■□□□□ 0.26
CCDC9-205ENST00000600117 COQ3Q9NZJ6 369 aa16.69■□□□□ 0.26
CCDC9-205ENST00000600117 FLNAP21333 2647 aaKnown RBP16.69■□□□□ 0.26
CCDC9-205ENST00000600117 ABCA4P78363 2273 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 DVL2O14641 736 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 RNF13O43567 381 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 ADAP00813 363 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 F13BP05160 661 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 POU2F1P14859 743 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 BMP5P22003 454 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 AHCYP23526 432 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 C1DQ13901 141 aaKnown RBP16.68■□□□□ 0.26
CCDC9-205ENST00000600117 ALG10Q5BKT4 473 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 FAHD1Q6P587 224 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 CD300LDQ6UXZ3 194 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 THSD4Q6ZMP0 1018 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 KIF18BQ86Y91 864 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 HIPK1Q86Z02 1210 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 WDFY1Q8IWB7 410 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 SVOPLQ8N434 492 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 GTPBP3Q969Y2 492 aaKnown RBP16.68■□□□□ 0.26
CCDC9-205ENST00000600117 TXNDC15Q96J42 360 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 GABARAPL1Q9H0R8 117 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 PLSCR4Q9NRQ2 329 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 INIPQ9NRY2 104 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 JKAMPQ9P055 326 aa16.68■□□□□ 0.26
CCDC9-205ENST00000600117 NOSIPQ9Y314 301 aaKnown RBP16.68■□□□□ 0.26
CCDC9-205ENST00000600117 VPS13CQ709C8 3753 aa16.67■□□□□ 0.26
CCDC9-205ENST00000600117 FREM1Q5H8C1 2179 aa16.67■□□□□ 0.26
CCDC9-205ENST00000600117 NPIPB13A6NJU9 1138 aa16.67■□□□□ 0.26
CCDC9-205ENST00000600117 NPIPB4C9JG80 1138 aa16.67■□□□□ 0.26
CCDC9-205ENST00000600117 MCIDASD6RGH6 385 aa16.67■□□□□ 0.26
CCDC9-205ENST00000600117 SERPINI2O75830 405 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms