RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 SCGB2A2Q13296 93 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 GSG1Q2KHT4 349 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 GTDC1Q4AE62 458 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 C6orf10Q5SRN2 563 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 ZNF627Q7L945 461 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 GLCCI1Q86VQ1 547 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 SNX32Q86XE0 403 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 UEVLDQ8IX04 471 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 C20orf196Q8IYI0 205 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 OR6S1Q8NH40 331 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 CENPHQ9H3R5 247 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 TPK1Q9H3S4 243 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 REV1Q9UBZ9 1251 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 CORINQ9Y5Q5 1042 aa18.24■□□□□ 0.51
PNKP-212ENST00000599454 C5orf58C9J3I9 102 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 M0R3G1 203 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 SNNO75324 88 aaPredicted RBP18.23■□□□□ 0.51
PNKP-212ENST00000599454 GLRXP35754 106 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 POLR2JP52435 117 aaKnown RBP18.23■□□□□ 0.51
PNKP-212ENST00000599454 RPS23P62266 143 aaKnown RBP18.23■□□□□ 0.51
PNKP-212ENST00000599454 RGNQ15493 299 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 TRMT5Q32P41 509 aaKnown RBP18.23■□□□□ 0.51
PNKP-212ENST00000599454 ALG10BQ5I7T1 473 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 FAM91A1Q658Y4 838 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 C12orf54Q6X4T0 127 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 RINLQ6ZS11 566 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 CROCCP2Q86T23 111 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 SCAIQ8N9R8 606 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 VPS33AQ96AX1 596 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 MRPL37Q9BZE1 423 aaKnown RBP18.23■□□□□ 0.51
PNKP-212ENST00000599454 KLHL14Q9P2G3 628 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 FBXL3Q9UKT7 428 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 NOX1Q9Y5S8 564 aa18.23■□□□□ 0.51
PNKP-212ENST00000599454 A0A1B0GWA3 101 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 LYNX1G3V0Z9 82 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 SEC14L2O76054 403 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 HLA-HP01893 362 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 LYNX1P0DP58 116 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 CD79AP11912 226 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 ZNF35P13682 527 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 NQO1P15559 274 aaKnown RBP18.22■□□□□ 0.51
PNKP-212ENST00000599454 ZNF14P17017 642 aaPredicted RBP18.22■□□□□ 0.51
PNKP-212ENST00000599454 GPR6P46095 362 aaPredicted RBP18.22■□□□□ 0.51
PNKP-212ENST00000599454 CCNIQ14094 377 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 PHYHD1Q5SRE7 291 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 ULK3Q6PHR2 472 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 ZNF813Q6ZN06 617 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 SLC41A3Q96GZ6 507 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 EPYCQ99645 322 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 POFUT2Q9Y2G5 429 aa18.22■□□□□ 0.51
PNKP-212ENST00000599454 IGKV1D-42A0A075B6H8 117 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 MS4A18H0YCH9 400 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 CLIC1O00299 241 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 TFP02787 698 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 NUDT7P0C024 238 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 KITP10721 976 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 ACHEP22303 614 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 HTR2AP28223 471 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 MRPS11P82912 194 aaKnown RBP18.21■□□□□ 0.51
PNKP-212ENST00000599454 MS4A18Q3C1V0 323 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 ELFN2Q5R3F8 820 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 CEP85LQ5SZL2 805 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 DHRS4L2Q6PKH6 230 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.21■□□□□ 0.51
PNKP-212ENST00000599454 GTF2H4Q92759 462 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 RDH5Q92781 318 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 MAL2Q969L2 176 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 SLC47A1Q96FL8 570 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 ZNF75AQ96N20 296 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 SPATA5L1Q9BVQ7 753 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 ASPNQ9BXN1 380 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 OCEL1Q9H607 264 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 SELENONQ9NZV5 590 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 TESQ9UGI8 421 aaKnown RBP18.21■□□□□ 0.51
PNKP-212ENST00000599454 GRIP1Q9Y3R0 1128 aa18.21■□□□□ 0.51
PNKP-212ENST00000599454 A0A087WUJ7 227 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 UBDO15205 165 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 TMEM33P57088 247 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 GALK2Q01415 458 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 MSMPQ1L6U9 139 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 CARD17Q5XLA6 110 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 KRT73Q86Y46 540 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 MIER2Q8N344 545 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 ANKRD42Q8N9B4 389 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 MGARPQ8TDB4 240 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 TMEM186Q96B77 213 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 MS4A3Q96HJ5 214 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 PAIP1Q9H074 479 aaKnown RBP18.2■□□□□ 0.5
PNKP-212ENST00000599454 RACGAP1Q9H0H5 632 aa18.2■□□□□ 0.5
PNKP-212ENST00000599454 METTL17Q9H7H0 456 aaPredicted RBP18.2■□□□□ 0.5
PNKP-212ENST00000599454 ZNF726A6NNF4 738 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 UBL3O95164 117 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 RAB36O95755 333 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 HPRP00739 348 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 SAGP10523 405 aaPredicted RBP18.19■□□□□ 0.5
PNKP-212ENST00000599454 LSP1P33241 339 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 WDR4P57081 412 aaKnown RBP18.19■□□□□ 0.5
PNKP-212ENST00000599454 NCALDP61601 193 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 RUNX1T1Q06455 604 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 PIGFQ07326 219 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms